16BO133

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16BO133
Virus classification Edit this classification
(unranked): Virus
Realm: Riboviria
Kingdom: Orthornavirae
Phylum: Pisuviricota
Class: Pisoniviricetes
Order: Nidovirales
Family: Coronaviridae
Genus: Betacoronavirus
Subgenus: Sarbecovirus
Species:
Strain:
16BO133

16BO133 is a

severe acute respiratory syndrome coronavirus 1
, and its genome sequence similarity is 82.8%.

Discovery

The 16BO133 virus was discovered in the oral cavity of the greater horseshoe bat in 2016. The genome of this virus strain is 29075 nt. Among SARSr-CoVs, 16BO133 is the closest to the JTMC15 virus, which was published in 2016 and discovered in Jilin, China, with a genome nucleic acid sequence similarity of 98.3%. Compared with other SARSr-CoVs, these two viruses have the ORF8 strain due to a frameshift mutation at the end of ORF7b.[1][2] The similarity of the genome nucleic acid sequence of 16BO133 virus and SARS-CoV is 82.8%.[3]

Although other SARSr-CoV strains have been found in Korea in the past (B15-21 virus, etc.), none of them have been sequenced.[4] The 16BO133 virus is the first Korean SARSr-CoV strain to be completely sequenced.[1]

Phylogenetic

A phylogenetic tree based on whole-genome sequences of SARS-CoV-1 and related coronaviruses is:

SARS‑CoV‑1 related coronavirus

16BO133, 86.3% to SARS-CoV-1,

Rhinolophus ferrumequinum, North Jeolla, South Korea[5]

Jilin[6]

Bat SARS CoV Rf1, 87.8% to SARS-CoV-1,

Rhinolophus ferrumequinum, Yichang, Hubei[7]

BtCoV HKU3, 87.9% to SARS-CoV-1,

Rhinolophus sinicus, Hong Kong and Guangdong[8]

Rhinolophus affinis, Baoshan, Yunnan[9]

Bat SARS-CoV/Rp3, 92.6% to SARS-CoV-1,

Rhinolophus pearsoni, Nanning, Guangxi[7]

Bat SL-CoV YNLF_31C, 93.5% to SARS-CoV-1,

Rhinolophus ferrumequinum, Lufeng, Yunnan[10]

Bat SL-CoV YNLF_34C, 93.5% to SARS-CoV-1,

Rhinolophus ferrumequinum, Lufeng, Yunnan[10]

Rhinolophus sinicus, Kunming, Yunnan[11]

Rhinolophus sinicus, Kunming, Yunnan[11]

Rhinolophus sinicus Kunming, Yunnan[12]

Paguma larvata, market in Guangdong, China[8]

SARS-CoV-1

SARS-CoV-2, 79% to SARS-CoV-1[13]


See also

References

  • Data related to 16BO133 at Wikispecies