Calcium-dependent chloride channel
TMEM16 | |||||||||
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TCDB 1.A.17 | | ||||||||
OPM superfamily | 369 | ||||||||
Membranome | 219 | ||||||||
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The Calcium-Dependent Chloride Channel (Ca-ClC) proteins (or calcium-activated chloride channels (CaCCs), Members of the Ca-CIC family are generally 600 to 1000 amino acyl residues (aas) in length and exhibit 7 to 10 transmembrane segments (TMSs).
Function
Tmc1 and Tmc2 (TC#s 1.A.17.4.6 and 1.A.17.4.1, respectively) may play a role in hearing and are required for normal function of cochlear hair cells, possibly as Ca2+ channels or Ca2+ channel subunits (see also family TC# 1.A.82).[11] Mice lacking both channels lack hair cell mechanosensory potentials.[12] There are 8 members of this family in humans, 1 in Drosophila and 2 in C. elegans. One of the latter two is expressed in mechanoreceptors.[13] Tmc1 is a sodium-sensitive cation channel required for salt (Na+) chemosensation in C. elegans "where it is required for salt-evoked neuronal activity and behavioural avoidance of high concentrations of NaCl".[14]
TMEM16A is over-expressed in several tumor types. The role of TMEM16A in gliomas and the potential underlying mechanisms were analyzed by Liu et al. 2014. Knockdown of TMEM16A suppressed cell proliferation, migration and invasion.[15]
The reactions believed to be catalyzed by channels of the Ca-ClC family are:[16]
Cl− (out) ⇌ Cl− (in)
and
Cations (e.g., Ca2+) (out) ⇌ Cations (e.g., Ca2+) (in)
In humans
CaCCs that are known to occur in humans include:
- Accessories: CLCA1, CLCA2, CLCA3, and CLCA4
- Anoctamins:[note 1] ANO1 and ANO2 (potentially others)[17]
- Bestrophins:
See also
Notes
- ^ The anoctamins are only expressed in eukaryotes, with 10 members in vertebrates.[7] Although all anoctamins are calcium-activated, not all members of this family are ion channels like ANO1; some are phospholipid scramblases.[7] ANO1 was the first anoctamin discovered, with three research groups independently identifying it in 2008.[7] A single protein homologue to the vertebrate anoctamins has been found in fungi and yeast, Aspergillus fumigatus and Saccharomyces cerevisiae, respsectively.[7]
References
- S2CID 4457894.
- PMID 15709976.
- ^ "CLCA1 chloride channel accessory 1 [Homo sapiens (human)]". Gene. National Center for Biotechnology Information. 13 January 2015.
- ^ S2CID 24285022.
- ^ PMID 19783045.
- ^ PMID 22002868.
- ^ S2CID 1396768.
- PMID 15284223.
- S2CID 52870095.
- PMID 24151904.
- PMID 23277480.
- PMID 22105175.
- PMID 20537990.
- PMID 23364694.
- PMID 24401903.
- ^ "1.A.17 The Calcium-Dependent Chloride Channel (Ca-ClC) Family". TCDB. Retrieved 16 April 2016.
- ^ a b "Calcium activated chloride channel". IUPHAR/BPS Guide to Pharmacology. Retrieved 7 October 2015.
Further reading
- "TCDB » SEARCH". www.tcdb.org. Retrieved 2016-04-16.
- Milenkovic VM, Brockmann M, Stöhr H, Weber BH, Strauss O (October 2010). "Evolution and functional divergence of the anoctamin family of membrane proteins". BMC Evolutionary Biology. 10 (1): 319. PMID 20964844.
- Kunzelmann K, Cabrita I, Wanitchakool P, Ousingsawat J, Sirianant L, Benedetto R, Schreiber R (March 2016). "Modulating Ca²⁺ signals: a common theme for TMEM16, Ist2, and TMC". Pflügers Archiv. 468 (3): 475–90. S2CID 14374080.
- Caputo A, Caci E, Ferrera L, Pedemonte N, Barsanti C, Sondo E, Pfeffer U, Ravazzolo R, Zegarra-Moran O, Galietta LJ (October 2008). "TMEM16A, a membrane protein associated with calcium-dependent chloride channel activity". Science. 322 (5901): 590–4. S2CID 52870095.
- Yang YD, Cho H, Koo JY, Tak MH, Cho Y, Shim WS, Park SP, Lee J, Lee B, Kim BM, Raouf R, Shin YK, Oh U (October 2008). "TMEM16A confers receptor-activated calcium-dependent chloride conductance". Nature. 455 (7217): 1210–5. S2CID 205214858.
- Ferrera L, Caputo A, Ubby I, Bussani E, Zegarra-Moran O, Ravazzolo R, Pagani F, Galietta LJ (November 2009). "Regulation of TMEM16A chloride channel properties by alternative splicing". The Journal of Biological Chemistry. 284 (48): 33360–8. PMID 19819874.
- Galietta LJ (December 2009). "The TMEM16 protein family: a new class of chloride channels?". Biophysical Journal. 97 (12): 3047–53. PMID 20006941.
- Hwang SJ, Blair PJ, Britton FC, O'Driscoll KE, Hennig G, Bayguinov YR, Rock JR, Harfe BD, Sanders KM, Ward SM (October 2009). "Expression of anoctamin 1/TMEM16A by interstitial cells of Cajal is fundamental for slow wave activity in gastrointestinal muscles". The Journal of Physiology. 587 (Pt 20): 4887–904. PMID 19687122.
- Schreiber R, Uliyakina I, Kongsuphol P, Warth R, Mirza M, Martins JR, Kunzelmann K (March 2010). "Expression and function of epithelial anoctamins". The Journal of Biological Chemistry. 285 (10): 7838–45. PMID 20056604.
As of this edit, this article uses content from "1.A.13 The Epithelial Chloride Channel (E-ClC) Family", which is licensed in a way that permits reuse under the