Christophe Fraser

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Professor

Christophe Fraser
Born1973 (age 50–51)
Academic background
Education
Infectious diseases
InstitutionsBig Data Institute
Main interestsMathematical modelling of infectious diseases, Viral evolution, Antimicrobial resistance, Emerging infectious disease
Websitehttps://www.bdi.ox.ac.uk/Team/christophe-fraser

Christophe Fraser is a professor of Infectious Disease Epidemiology in the

Nuffield Department of Medicine at the University of Oxford.[1]

Fraser's PhD and initial postdoctoral research were in theoretical particle physics. He converted to infectious disease epidemiology in 1998, based first at the University of Oxford then at Imperial College London, where he became Chair of Theoretical Epidemiology and served as deputy director of the MRC Centre for Outbreak Analysis and Modelling.[2] He returned to the University of Oxford in 2016 as Senior Group Leader in Pathogen Dynamics at the Big Data Institute.[1] In 2022 he was appointed Moh Family Foundation Professor of Infectious Disease Epidemiology as part of the University of Oxford's newly created Pandemic Sciences Institute.[3]

Research on HIV

Fraser and colleagues were among the first to hypothesise that the large variability in virulence observed between individuals living with HIV could be partly due to genetic variation in the virus.[4] In other words they hypothesised that virulence, considered as a phenotype of the virus, has appreciable heritability. They[5][6][7] and others[8][9][10][11] later provided evidence for this. Fraser was principal investigator of the BEEHIVE project to investigate the mechanism of this heritability,

UNAIDS stated that the discovery "provides evidence of urgency to halt the pandemic and reach all with testing and treatment".[15]

Research on the COVID-19 pandemic

In March 2020 Fraser and his research group published epidemiological modelling supporting 'digital contact tracing' using COVID-19 apps to reduce the spread of SARS-CoV-2.[16] Fraser provided advice to the British government[17] and more broadly[18] about implementing such apps, including designing a risk evaluation algorithm with Anthony Finkelstein and others.[19] Fraser's team developed the OpenABM-Covid-19

NHS to model the pandemic, winning the 2021 Analysis in Government award for Innovative methods.[21]

Research on other
outbreaks

Fraser worked on the 2002–2004 SARS outbreak,[22] the 2009 swine flu pandemic,[23] the

2012 MERS outbreak[24]
and the Western African Ebola virus epidemic.[25]

Methodological research

Fraser's publications[26] include "Factors that make an infectious disease outbreak controllable",[27] 2004, which argued that in addition to the basic reproduction number a second key parameter of an infectious disease is the proportion of transmission that occurs before the onset of

symptoms
. This proportion being large for SARS-CoV-2 was a key difficulty in
infection control
for the COVID-19 pandemic.

Fraser's 2007 analysis "Estimating Individual and Household Reproduction Numbers in an Emerging Epidemic"[28] first defined an estimator for the instantaneous (time-varying) reproduction number that was subsequently widely used.[29] The definition was obtained by inverting the standard relationship between the reproduction number, the generation time distribution and the parameter of the

Euler-Lotka equation as it is known in demography
; the two are equivalent due to actual births being analogous to infectious disease transmissions as 'epidemiological births', giving rise to a new infected individual).

References

  1. ^ a b "Christophe Fraser, Oxford Big Data Institute". www.bdi.ox.ac.uk.
  2. ^ "Christophe Fraser, Imperial College London". www.imperial.ac.uk.
  3. ^ "University of Oxford News".
  4. PMID 17954909
    .
  5. PMC 2865511. {{cite journal}}: Cite journal requires |journal= (help
    )
  6. .
  7. hdl:10044/1/56788. {{cite journal}}: Cite journal requires |journal= (help
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  8. .
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  10. doi:10.1016/j.tim.2016.04.008. {{cite journal}}: Cite journal requires |journal= (help
    )
  11. PMC 5300119. {{cite journal}}: Cite journal requires |journal= (help
    )
  12. ^ "BEEHIVE".
  13. ^ AP (3 February 2022). "Study identifies virulent HIV variant unrecognized for years".
  14. PMID 35113714
    .
  15. ^ UNAIDS (7 February 2022). "Identification of fast-spreading HIV variant provides evidence of urgency to halt the pandemic and reach all with testing and treatment".
  16. PMID 32234805
    .
  17. ^ "Coronavirus: NHS contact tracing app to target 80% of smartphone users". BBC News. 16 April 2020.
  18. ^ "REF 2021 Impact Case Study".
  19. ^ "Defining an epidemiologically meaningful contact from phone proximity events: uses for digital contact tracing" (PDF).
  20. PMID 34252083
    .
  21. ^ "2021 Analysis in Government awards".
  22. S2CID 6429913
    .
  23. .
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  26. ^ Christophe Fraser publications indexed by Google Scholar Edit this at Wikidata
  27. PMID 15071187
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  28. .
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