Membrane fusion protein
Membrane fusion proteins (not to be confused with chimeric or
Fusion in eukaryotes
Eukaryotic genomes contain several
SNARE family
The SNARE family include bona fide eukaryotic fusion proteins. They are only found in eukaryotes and their closest
Retroviral
These proteins originate from the
HAP2 family
Pathogenic viral fusion
Enveloped viruses readily overcome the thermodynamic barrier of merging two plasma membranes by storing kinetic energy in fusion (F) proteins. F proteins can be independently expressed on host cell surfaces which can either (1) drive the infected cell to fuse with neighboring cells, forming a
Class I
Class I fusion proteins resemble influenzavirus hemagglutinin in their structure. Post-fusion, the active site has a trimer of α-helical coiled-coils. The binding domain is rich in α-helices and hydrophobic fusion peptides located near the N-terminus. Fusion conformation change can often be controlled by pH.[7][8]
Class II
Class II proteins are dominant in β-sheets and the catalytic sites are localized in the core region. The peptide regions required to drive fusion are formed from the turns between the β-sheets.[7][8]
Class III
Class III fusion proteins are distinct from I and II. They typically consist of 5 structural domains, where domain 1 and 2 localized to the C-terminal end often contain more β-sheets and domains 2-5 closer to the N-terminal side are richer in α-helices. In the pre-fusion state, the later domains nest and protect domain 1 (i.e. domain 1 is protected by domain 2, which is nested in domain 3, which is protected by domain 4). Domain 1 contains the catalytic site for membrane fusion.[7][8]
Class IV
Class IV fusion proteins, better known as
Examples
Fusion protein | Abbreviation | Class | Virus family | Example viruses | Reference |
---|---|---|---|---|---|
Coronavirus spike protein | S | I | Coronaviridae | SARS-CoV, SARS-CoV-2
|
[11][12] |
Ebolavirus glycoprotein | GP | I | Filoviridae | Sudan- ebolaviruses, Marburgvirus
|
[6][13] |
Glycoprotein 41 | Gp41 | I | Retroviridae
|
HIV | [6][13] |
Hemagglutinin | H, HA, HN | I | Orthomyxoviridae, Paramyxoviridae | measles virus, mumps virus
|
[6][13] |
Alphavirus envelope protein E1 | E1 | II | Togaviridae
|
Semliki Forest virus | [6][13] |
Flavivirus envelope protein | E | II | Flaviviridae | Dengue virus, West Nile virus | [6][13] |
Herpesvirus glycoprotein B | gB | III | Herpesviridae | HSV-1 | [6][14] |
VSV G | G | III | Rhabdoviridae | Vesicular stomatitis virus, rabies lyssavirus | [6][14] |
Fusion-associated small transmembrane protein | FAST | IV | Reoviridae
|
Avian orthoreovirus | [6][10] |
See also
- Interbilayer forces in membrane fusion
- Viral membrane fusion proteins
References
External links
- Membrane+fusion+proteins at the U.S. National Library of Medicine Medical Subject Headings (MeSH)