Cyclic compound

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A cyclic compound (or ring compound) is a term for a compound in the field of chemistry in which one or more series of atoms in the compound is connected to form a ring. Rings may vary in size from three to many atoms, and include examples where all the atoms are carbon (i.e., are carbocycles), none of the atoms are carbon (inorganic cyclic compounds), or where both carbon and non-carbon atoms are present (heterocyclic compounds with rings containing both carbon and non-carbon). Depending on the ring size, the bond order of the individual links between ring atoms, and their arrangements within the rings, carbocyclic and heterocyclic compounds may be aromatic or non-aromatic; in the latter case, they may vary from being fully saturated to having varying numbers of multiple bonds between the ring atoms. Because of the tremendous diversity allowed, in combination, by the valences of common atoms and their ability to form rings, the number of possible cyclic structures, even of small size (e.g., < 17 total atoms) numbers in the many billions.

Adding to their complexity and number, closing of atoms into rings may lock particular atoms with distinct substitution (by functional groups) such that stereochemistry and chirality of the compound results, including some manifestations that are unique to rings (e.g., configurational isomers). As well, depending on ring size, the three-dimensional shapes of particular cyclic structures – typically rings of five atoms and larger – can vary and interconvert such that conformational isomerism is displayed. Indeed, the development of this important chemical concept arose historically in reference to cyclic compounds. Finally, cyclic compounds, because of the unique shapes, reactivities, properties, and bioactivities that they engender, are the majority of all molecules involved in the biochemistry, structure, and function of living organisms, and in man-made molecules such as drugs, pesticides, etc.

Structure and classification

A cyclic compound or ring compound is a compound in which at least some its atoms are connected to form a ring.[1] Rings vary in size from three to many tens or even hundreds of atoms. Examples of ring compounds readily include cases where:

  • all the atoms are carbon (i.e., are
    carbocycles
    ),
  • none of the atoms are carbon (inorganic cyclic compounds),[2] or where
  • both carbon and non-carbon atoms are present (
    heterocyclic
    compounds with rings containing both carbon and non-carbon).

Common atoms can (as a result of their

saturated to having varying numbers of multiple bonds. As a consequence of the constitutional variability that is thermodynamically possible in cyclic structures, the number of possible cyclic structures, even of small size (e.g., <17 atoms) numbers in the many billions.[3]

Moreover, the closing of atoms into rings may lock particular

configurational isomers);[4] As well, depending on ring size, the three-dimensional shapes of particular cyclic structures — typically rings of five atoms and larger — can vary and interconvert such that conformational isomerism is displayed.[4]

Carbocycles

The vast majority of cyclic compounds are organic, and of these, a significant and conceptually important portion are composed of rings made only of carbon atoms (i.e., they are carbocycles).[citation needed]

Inorganic cyclic compounds

Inorganic atoms form cyclic compounds as well. Examples include

germanabenzene, stannabenzene, and phosphorine, aromaticity is retained, and so aromatic inorganic cyclic compounds are also known and well-characterized.[citation needed
]

Heterocyclic compounds

A heterocyclic compound is a cyclic compound that has atoms of at least two different

heterocyclic carbon compounds, and the name refers to inorganic cyclic compounds as well (e.g., siloxanes, which contain only silicon and oxygen in the rings, and borazines, which contain only boron and nitrogen in the rings).[5] Hantzsch–Widman nomenclature is recommended by the IUPAC for naming heterocycles, but many common names remain in regular use.[citation needed
]

Macrocycles

The term

transannular nonbonded interactions within the ring (e.g., with the chair and chair-boat being more stable than the boat-boat conformation for cyclooctane, because of the interactions depicted by the arcs shown).[citation needed] Medium rings (8-11 atoms) are the most strained, with between 9-13 (kcal/mol) strain energy, and analysis of factors important in the conformations of larger macrocycles can be modeled using medium ring conformations.[8] Conformational analysis of odd-membered rings suggests they tend to reside in less symmetrical forms with smaller energy differences between stable conformations.[9]

porphine; D, a mixed amine/imine, the Curtis macrocycle; E, the related enamine/imine Jäger macrocycle, and F, the tetracarboxylate-derivative DOTA
macrocycle.

Nomenclature

alicyclic structures.[citation needed] The term macrocycle is used when a ring-containing compound has a ring of 12 or more atoms.[6][7] The term polycyclic is used when more than one ring appears in a single molecule. Naphthalene
is formally a polycyclic compound, but is more specifically named as a bicyclic compound. Several examples of macrocyclic and polycyclic structures are given in the final gallery below.

The atoms that are part of the ring structure are called annular atoms.[10]

Isomerism

Stereochemistry

The closing of atoms into rings may lock particular atoms with distinct

configurational isomers).[4]

Conformational isomerism

Two conformers of cyclohexane, the chair at left, and the boat at right. Axial and equatorial hydrogen atoms are denoted with an a and e, respectively.

Depending on ring size, the three-dimensional shapes of particular cyclic structures—typically rings of 5-atoms and larger—can vary and interconvert such that

carbocycles
with no double bonds, to which various substituents might be attached, see image—display an equilibrium between two conformations, the chair and the boat, as shown in the image.

The chair conformation is the favored configuration, because in this conformation, the

steric strain, leading to a shift in equilibrium from boat to chair, is the interaction between the two methyl groups in cis-1,4-dimethylcyclohexane. In this molecule, the two methyl groups are in opposing positions of the ring (1,4-), and their cis stereochemistry projects both of these groups toward the same side of the ring. Hence, if forced into the higher energy boat form, these methyl groups are in steric contact, repel one another, and drive the equilibrium toward the chair conformation.[4]

Aromaticity

Cyclic compounds may or may not exhibit aromaticity; benzene is an example of an aromatic cyclic compound, while cyclohexane is non-aromatic. In organic chemistry, the term aromaticity is used to describe a cyclic (ring-shaped), planar (flat) molecule that exhibits unusual stability as compared to other geometric or connective arrangements of the same set of atoms. As a result of their stability, it is very difficult to cause aromatic molecules to break apart and to react with other substances. Organic compounds that are not aromatic are classified as aliphatic compounds—they might be cyclic, but only aromatic rings have especial stability (low reactivity).

Since one of the most commonly encountered aromatic systems of compounds in organic chemistry is based on derivatives of the prototypical aromatic compound benzene (an aromatic hydrocarbon common in petroleum and its distillates), the word “aromatic” is occasionally used to refer informally to benzene derivatives, and this is how it was first defined. Nevertheless, many non-benzene aromatic compounds exist. In living organisms, for example, the most common aromatic rings are the double-ringed bases in RNA and DNA. A functional group or other substituent that is aromatic is called an aryl group.

The earliest use of the term “aromatic” was in an article by August Wilhelm Hofmann in 1855. Hofmann used the term for a class of benzene compounds, many of which do have odors (aromas), unlike pure saturated hydrocarbons. Today, there is no general relationship between aromaticity as a chemical property and the olfactory properties of such compounds (how they smell), although in 1855, before the structure of benzene or organic compounds was understood, chemists like Hofmann were beginning to understand that odiferous molecules from plants, such as terpenes, had chemical properties we recognize today are similar to unsaturated petroleum hydrocarbons like benzene.

In terms of the electronic nature of the molecule, aromaticity describes a conjugated system often made of alternating single and double bonds in a ring. This configuration allows for the electrons in the molecule's pi system to be delocalized around the ring, increasing the molecule's stability. The molecule cannot be represented by one structure, but rather a resonance hybrid of different structures, such as with the two resonance structures of benzene. These molecules cannot be found in either one of these representations, with the longer single bonds in one location and the shorter double bond in another (See Theory below). Rather, the molecule exhibits bond lengths in between those of single and double bonds. This commonly seen model of aromatic rings, namely the idea that benzene was formed from a six-membered carbon ring with alternating single and double bonds (cyclohexatriene), was developed by August Kekulé (see History section below). The model for benzene consists of two resonance forms, which corresponds to the double and single bonds superimposing to produce six one-and-a-half bonds. Benzene is a more stable molecule than would be expected without accounting for charge delocalization.[citation needed]

Principal uses

Because of the unique shapes, reactivities, properties, and

living organisms
, and in the man-made molecules (e.g., drugs, herbicides, etc.) through which man attempts to exert control over nature and biological systems.

Synthetic reactions

Important general reactions for forming rings

Dieckmann ring-closing reaction

There are a variety of specialized reactions whose use is solely the formation of rings, and these will be discussed below. In addition to those, there are a wide variety of general organic reactions that historically have been crucial in the development, first, of understanding the concepts of ring chemistry, and second, of reliable procedures for preparing ring structures in high

yield, and with defined orientation of ring substituents (i.e., defined stereochemistry
). These general reactions include:

Ring-closing reactions

In organic chemistry, a variety of synthetic procures are particularly useful in closing carbocyclic and other rings; these are termed ring-closing reactions. Examples include:

Ring-opening reactions

A variety of further synthetic procedures are particularly useful in opening carbocyclic and other rings, generally which contain a double bound or other functional group "handle" to facilitate chemistry; these are termed ring-opening reactions. Examples include:

  • ring opening metathesis, which can also be used to accomplish a specific type of polymerization
    .

Ring expansion and ring contraction reactions

Ring expansion and contraction reactions are common in

bicyclic compounds
as several examples.

Examples

Simple, mono-cyclic examples

The following are examples of simple and aromatic carbocycles, inorganic cyclic compounds, and heterocycles:

Complex and polycyclic examples

The following are examples of cyclic compounds exhibiting more complex ring systems and stereochemical features:

  • Complex cyclic compounds: Macrocyclic and polycyclic examples
  • Naphthalene, technically a polycyclic, more specifically a bicyclic compound, with circles showing delocalization of π-electrons (aromatic).
    delocalization
    of π-electrons (aromatic).
  • Decalin (decahydronaphthalene), the fully saturated derivative of naphthalene, showing the two stereochemistries possible for "fusing" the two rings together, and how this impacts the shapes available to this bicyclic compound (non-aromatic).
    Decalin (decahydronaphthalene), the fully saturated derivative of naphthalene, showing the two stereochemistries possible for "fusing" the two rings together, and how this impacts the shapes available to this bicyclic compound (non-aromatic).
  • Longifolene, a terpene natural product, and an example of a tricyclic molecule (non-aromatic).
    Longifolene, a terpene natural product, and an example of a tricyclic molecule (non-aromatic).
  • Paclitaxel, a polycyclic natural product with a tricyclic core: with a heterocyclic, 4-membered D ring, fused to further 6- and 8-membered carbocyclic (A/C and B) rings (non-aromatic), and with three further pendant phenyl-rings on its "tail", and attached to C-2 (abbrev. Ph, C6H5; aromatics).
    phenyl
    -rings on its "tail", and attached to C-2 (abbrev. Ph, C6H5; aromatics).
  • A representative three-dimensional shape adopted by paclitaxel, as a result of its unique cyclic structure.[11]
    A representative three-dimensional shape adopted by paclitaxel, as a result of its unique cyclic structure.[11]
  • Cholesterol, another terpene natural product, in particular, a steroid, a class of tetracyclic molecules (non-aromatic).
    Cholesterol, another terpene natural product, in particular, a steroid, a class of tetracyclic molecules (non-aromatic).
  • Benzo[a]pyrene, a pentacyclic compound both natural and man-made, and delocalized π-electrons shown as discrete bonds (aromatic).
    delocalized
    π-electrons shown as discrete bonds (aromatic).
  • Pagodane, a complex, highly symmetric, man-made polycyclic compound (non-aromatic).
    Pagodane, a complex, highly symmetric, man-made polycyclic compound (non-aromatic).
  • Brevetoxin A, a natural product with ten rings, all fused, and all heterocyclic, and a toxic component associated with the organisms responsible for red tides. The R group at right refers to one of several possible four-carbon side chains (see main Brevetoxin article; non-aromatic).
    red tides. The R group at right refers to one of several possible four-carbon side chains (see main Brevetoxin
    article; non-aromatic).

See also

References

  1. ]
  2. .
  3. .
  4. ^ a b c d e f g William Reusch (2010). "Stereoisomers Part I" in Virtual Textbook of Organic Chemistry. Michigan State University. Archived from the original on 10 March 2015. Retrieved 7 April 2015.
  5. ^
    IUPAC Gold Book heterocyclic compounds
  6. ^ .
  7. ^ a b J. D. Dunitz (1968). J. D. Dunitz and J. A. Ibers (ed.). Perspectives in Structural Chemistry. Vol. 2. New York: Wiley. pp. 1–70.
  8. ^ Eliel, E.L., Wilen, S.H. and Mander, L.S. (1994) Stereochemistry of Organic Compounds, John Wiley and Sons, Inc., New York.[page needed]
  9. .
  10. from the original on 2021-04-13. Retrieved 2020-09-14.
  11. from the original on 2021-01-22. Retrieved 2020-09-14.

Further reading

External links