Deferribacteraceae

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Deferribacteraceae
Scientific classification Edit this classification
Domain: Bacteria
Phylum: Deferribacterota
Garrity and Holt 2021[1]
Class: Deferribacteres
Huber and Stetter 2002
Order: Deferribacterales
Huber and Stetter 2002
Family: Deferribacteraceae
Huber and Stetter 2002
Genera
Synonyms
  • Deferribacterota:
    • "Deferribacteres" Garrity and Holt 2001
    • "Deferribacterota" Whitman et al. 2018
    • "Deferribacteraeota" Oren et al. 2015
  • Deferribacteres:
    • Ferrobacteria
      Cavalier-Smith
      2002
    • "Deferribacteria" Cavalier-Smith 2020
  • Deferribacterales:
    • Geovibriales (sic) Cavalier-Smith 2002

The Deferribacteraceae are a family of gram-negative bacteria which make energy by anaerobic respiration.[2]

Description

Deferribacteraceae are rod-shaped, although the rods may be straight or bent. They are gram-negative. Deferribacteraceae perform anaerobic respiration using iron, manganese, or nitrate. They can also produce energy by fermentation. The type genus of the family is Deferribacter.[2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LSPN) [3] [4]

  • Phylum Deferribacterota Garrity and Holt 2021
    • Class Deferribacteres Huber & Stetter 2002
      • Order Deferribacterales Huber & Stetter 2002
        • Genus ?Petrothermobacter Tamazawa et al. 2017
        • Family Calditerrivibrionaceae Spring et al. 2022
        • Family Deferribacteraceae Huber & Stetter 2002
        • Family Deferrivibrionaceae Zavarzina et al. 2023
        • Family Flexistipitaceae Spring et al. 2022
        • Family Geovibrionaceae Cavalier-Smith 2020
        • Family Mucispirillaceae Spring et al. 2022
16S rRNA based
LTP_08_2023[5][6][7]
 120 single copy marker proteins based GTDB 08-RS214[8][9][10]
Deferribacteraceae

Flexistipes Fiala et al. 2000

Deferribacter Greene et al. 1997

Mucispirillum Robertson et al. 2005

Calditerrivibrio Iino et al. 2008

Deferrivibrio Zavarzina et al. 2023

Petrothermobacter Tamazawa et al. 2017

Limisalsivibrio Spring et al. 2022

Geovibrio Caccavo et al. 2000

Denitrovibrio Myhr & Torsvik 2000

Seleniivibrio Rauschenbach et al. 2013

Deferribacterales
Flexistipitaceae

Flexistipes

Calditerrivibrionaceae

Calditerrivibrio

Deferrivibrionaceae

Deferrivibrio

Deferribacteraceae

Deferribacter

History

The family was first described in 2001 in order to hold the genera Deferribacter, Flexistipes, and Geovibrio.[2]

See also

References

  1. S2CID 239887308
    .
  2. ^
    phototrophic
    Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). pp. 465-466.
  3. ^ See the List of Prokaryotic names with Standing in Nomenclature. Data extracted from the "Deferribacteres". Retrieved 2013-03-20.
  4. ^ See the NCBI webpage on Deferribacteres Data extracted from the "NCBI Taxonomy Browser". National Center for Biotechnology Information. Retrieved 2013-03-20.
  5. ^ "The LTP". Retrieved 20 November 2023.
  6. ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
  7. ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
  8. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  9. ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  10. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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