Desulfosporosinus
Desulfosporosinus | |
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Scientific classification | |
Domain: | |
Phylum: | |
Class: | |
Order: | Clostridiales |
Family: | |
Genus: | Desulfosporosinus |
Type species | |
Desulfosporosinus orientis (Adams & Postgate 1959) Stackebrandt et al. 1997
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Species | |
See text. |
Desulfosporosinus is a genus of strictly anaerobic,
The type species D. orientis was isolated in 1959[3] with the proposed name Desulfovibrio orientis, and was later assigned to the genus Desulfotomaculum.[4] Based on 16S rRNA gene sequence data Desulfotomaculum orientis was reclassified as Desulfosporosinus orientis in 1997.[1]
Species
Species | Type strain | Isolated from | Notes | References |
---|---|---|---|---|
D. acididurans | M1 (DSM 27692) | Acidic sediment | moderately acidophilic | [5] |
D. acidiphilus | SJ4 (DSM 22704) | Acid mine drainage sediment | moderately acidophilic | [6] |
D. auripigmenti | OREX-4 (DSM 13351) | Freshwater sediment | ([7]) [8] | |
D. burensis | BSREI1 (DSM 24089) | Borehole | [9] | |
D. fructosivorans | 63.6F (DSM140297) | Marine subsurface sediment | [10] | |
D. hippei | 343 (DSM 8344) | Permafrost soil | [2] | |
D. lacus | STP12 (DSM 15449) | Freshwater sediment | [11] | |
D. meridiei | S10 (DSM 13257) | Gasolene-contaminated groundwater | [12] | |
D. nitroreducens | 59.4B (DSM 140295) | Marine subsurface sediment | [13] | |
D. orientis | Singapore I (DSM 765) | Soil | ([3][4]) [1] | |
D. youngiae | JW/YJL-B18 (DSM 17734) | Constructed wetland / acid mine drainage sediment | [14] |
Genomes
Five complete Desulfosporosinus genomes are available, and another two genomes are in the progress of being sequenced.
Strain | Status | Year | Accession number | References |
---|---|---|---|---|
D. acididurans M1 | Published draft | 2015 | LDZY00000000 | [15] |
D. acidiphilus SJ4 | Complete and published | 2012 | CP003639 | [16] |
D. meridiei S10 | Complete and published | 2012 | CP003629 | [16] |
D. orientis Singapore I | Complete and published | 2011 | CP003108 | [16] |
D. sp. OT | Complete and published | 2011 | AGAF00000000 | [17] |
D. youngiae JW/YJL-B18 | Complete and published | 2011 | CM001441 | [16] |
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[18] and National Center for Biotechnology Information (NCBI)[19]
16S rRNA based | 120 marker proteins based GTDB 08-RS214[23][24][25] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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See also
References
- ^ PMID 9336920.
- ^ PMID 18450718.
- ^ PMID 13654719.
- ^ S2CID 237235010.
- S2CID 5158675.
- S2CID 25655510.
- S2CID 2354562.
- PMID 13130030.
- PMID 22544786.
- PMID 28646634.)
{{cite journal}}
: CS1 maint: numeric names: authors list (link - PMID 17158969.
- PMID 11211250.
- PMID 28646634.)
{{cite journal}}
: CS1 maint: numeric names: authors list (link - PMID 19625426.
- PMID 26251501.
- ^ PMID 23105050.
- PMID 21994931.
- ^ J.P. Euzéby. "Desulfosporosinus". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-09-09.
- ^ Sayers; et al. "Desulfosporosinus". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-09-09.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
External links
- Desulfosporosinus at LPSN
- Desulfosporosinus at NCBI
- Desulfosporosinus at GOLD
- Desulfosporosinus at NamesforLife