Haplogroup J-M267
Haplogroup J-M267 | |
---|---|
J-P209 | |
Descendants | J-M62, J-M365.1, J-L136, J-Z1828 |
Defining mutations | M267, L255, L321, L765, L814, L827, L1030 |
Haplogroup J-M267, also commonly known as Haplogroup J1, is a
Men from this lineage share a common
Origins
Since the discovery of haplogroup J-P209 it has generally been recognized that it shows signs of having evolved ~ 20,000 years ago somewhere in northwestern Iran, the Caucasus, the Armenian Highlands, and northern Mesopotamia.[5][6][3] The frequency and diversity of both its major branches, J-M267 and J-M172, in that region makes them candidates as genetic markers of the spread of farming technology during the Neolithic, which is proposed to have had a major impact upon human populations.
J-M267 has several recognized subclades, some of which were recognized before J-M267 itself was recognized, for example J-M62 Y Chromosome Consortium "YCC" 2002. With one notable exception, J-P58, most of these are not common (Tofanelli 2009). Because of the dominance of J-P58 in J-M267 populations in many areas, discussion of J-M267's origins require a discussion of J-P58 at the same time.
Distribution
Africa
North Africa and Horn of Africa
North Africa received Semitic migrations, according to some studies it may have been diffused in recent time by Arabs who, mainly from the 7th century A.D., expanded to northern Africa (
Population | Sample size | J*(xJ-M172) | total J-M267 | J-M267(xP58) | J-P58 | publication | previous research on same samples |
Algeria (Arabs from Oran) | 102 | NA | 22.5% | NA | NA | Robino 2007 | |
Algeria | 20 | NA | 35% | NA | NA | Semino 2004 | |
Egypt | 147 | NA | 21.1% | 1.4% | 19.7% | Chiaroni 2009 | Luis 2004 |
Egypt | 124 | NA | 19.8% | NA | NA | El-Sibai 2009 | |
Egypt (Siwa, Western Desert) | 35 | NA | 31.4% | NA | NA | Kujanová 2009 | |
Libya (Tuareg) | 47 | NA | 0% | NA | NA | Ottoni 2011 | |
Libya (Benghazi) | 238 | NA | 39.5% | NA | NA | Alvarez 2014[7] | Elmrghni 2012 |
Morocco (Arabs) | 87 | NA | 26.4% | NA | NA | Fadhlaoui-Zid 2013[8] | |
Morocco (Arabs) | 49 | NA | 20.4% | NA | NA | Semino 2004 | |
Morocco (Arabs) | 28 | NA | 60.7% | NA | NA | Underhill 2000[9] | |
Morocco (Arabs) | 19 | NA | 31.5% | NA | NA | Francalacci 2008[10] | |
Morocco (Berbers) | 64 | NA | 6.3% | NA | NA | Semino 2004 | |
Morocco (Berbers) | 103 | NA | 10.7% | NA | NA | Semino 2004 | |
Morocco (Rabat) | 267 | NA | 21.3% | NA | NA | Alvarez 2014 | Aboukhalid 2010 |
Morocco (Casablanca) | 166 | NA | 15.7% | NA | NA | Alvarez 2014 | Laouina 2011 |
Morocco (Figuig) | 96 | NA | 29.2% | NA | NA | Alvarez 2014 | Palet 2010 |
Morocco (El Jadida) | 49 | NA | 8.2% | NA | NA | Alvarez 2014 | |
Morocco (Fes) | 108 | NA | 16.7% | 0.0% | 16.7% | Regueiro 2015 | |
Tunisia | 73 | NA | 34.2% | NA | NA | Semino 2004 | |
Tunisia | 601 | Na | 16.64% | NA | NA | Pestano J, et al. (2013)[11] | |
Tunisia (Sousse) | 220 | NA | 25.9% | 0.0% | 25.9% | Fadhlaoui-Zid 2015[12] | |
Tunisia (Tunis) | 148 | NA | 32.4% | 1.3% | 31.1% | Grugni 2012 | Arredi 2004 |
Tunisia | 52 | NA | 34.6% | NA | NA | Onofri 2008 | |
Tunisia (Bou Omran Berbers) | 40 | NA | 0% | NA | NA | Ennafaa 2011 | |
Tunisia (Bou Saad Berbers) | 40 | NA | 5% | 0% | 5% | Ennafaa 2011 | |
Tunisia (Jerbian Arabs) | 46 | NA | 8.7% | NA | NA | Ennafaa 2011 | |
Tunisia (Jerbian Berbers) | 47 | NA | 0% | NA | NA | Ennafaa 2011 | |
Tunisia (Sened Berbers) | 35 | NA | 31.4% | 0% | 31.4% | Fadhlaoui-Zid 2011 | |
Tunisia (Andalusi Zaghouan) | 32 | NA | 43.8% | 0% | 43.8% | Fadhlaoui-Zid 2011 | |
Tunisia (Cosmopolitan Tunis) | 33 | NA | 24.2 | 0% | 24.2% | Fadhlaoui-Zid 2011 | |
Tunisia (Sejenane) | 47 | NA | 34.0% | NA | NA | Alvarez 2014 | Frigi 2011 |
Tunisia (Sfax) | 56 | NA | 25% | 0.0% | 25% | Regueiro 2015 | |
Tunisia (Beja) | 72 | NA | 15.3% | 0.0% | 15.3% | Regueiro 2015 | |
Canary Islands (pre-Hispanic) | 30 | NA | 16.7% | NA | NA | Fregel 2009 | |
Canary Islands (17th-18th c) | 42 | NA | 11.9% | NA | NA | Fregel 2009 | |
Canary Islands | 652 | NA | 3.5% | NA | NA | Fregel 2009 | |
Sahrawis |
89 | NA | 20.2% | NA | NA | Fregel 2009 | Bosch 2001 and Flores 2001 |
Sudan (Khartoum) | 35 | NA | 74.3% | 0.0% | 74.3% | Chiaroni 2009 | Tofanelli 2009 and Hassan 2008 |
Sudan (Sudanese Arabs) | 35 | NA | 17.1% | 0.0% | 17.1% | Chiaroni 2009 | Hassan 2008 |
Sudan (Nilo-Saharans) | 61 | NA | 4.9% | 3.3% | 1.6% | Chiaroni 2009 | Hassan 2008 |
Ethiopia (Oromo) | 78 | NA | 2.6% | 2.6% | 0.0% | Chiaroni 2009 | Semino 2004 |
Ethiopia (Amhara) | 48 | NA | 29.2% | 8.3% | 20.8% | Chiaroni 2009 | Semino 2004 |
Ethiopia (Arsi) | 85 | 22% | NA | NA | NA | Moran 2004 | |
Ethiopia | 95 | 21% | NA | NA | NA | Moran 2004 | |
Somalis [1]
|
201 | 0.5% | 2.5% | NA | 2.5% | Sanchez 2005 | J-P58 might be 5% in upcoming study |
Comoros | 293 | NA | 5.0% | NA | NA | Msaidie 2011 | |
South Africa (Lemba) | 76 | NA | 39.5% | 26.3% | 13.2% | Soodyall 2011 | |
Zimbabwe (Lemba) | 54 | NA | 9.3% | 9.3% | NA | Soodyall 2011 |
Asia
South Asia
J*(xJ-M172) was found in India among Indian Muslims.[13]
Population | Sample size | J*(xJ-M172) | total J-M267 | J-M267(xP58) | J-P58 | Publication |
India (Shia) | 161 | 10.6% | NA | NA | NA | Eaaswarkhanth 2009 |
India (Sunni) | 129 | 2.3% | NA | NA | NA | Eaaswarkhanth 2009 |
India (Mappla) | 40 | 10% | NA | NA | NA | Eaaswarkhanth 2009 |
West Asia
The area including eastern Turkey and the Zagros and Taurus mountains, has been identified as a likely area of ancient J-M267 diversity. Both J-P58 and other types of J-M267 are present, sometimes with similar frequencies.
Population | Sample size | Total J-M267 | J-M267(xP58) | J-P58 | Publication | Previous research on same samples |
Turkey | 523 | 9.0% | 3.1% | 5.9% | Chiaroni 2009 | Cinnioğlu 2004 |
Iran | 150 | 11.3% | 2.7% | 8.7% | Chiaroni 2009 | Regueiro 2006 |
Iran (Khuzestan) | NA | 33.4% | NA | NA | Kivisild 2012[14] | |
Iraq (Kurds) | 93 | 11.8% | 4.3% | 7.5% | Chiaroni 2009 | |
Iraq (Assyrians) | 28 | 28.6% | 17.9% | 10.7% | Chiaroni 2009 | |
Iraq (Arabs) | 56 | 64.1% | 1.8% | 62.3% | Chiaroni 2009 | Tofanelli 2009 |
Iran (Assyrians) | 31 | 16.1% | 9.7% | 6.5% | Chiaroni 2009 | |
Iran | 92 | 3.2% | NA | NA | El-Sibai 2009 | |
Turkey (Assyrians) | 25 | 20.0% | 16.0% | 4.0% | Chiaroni 2009 |
Levant and Semitic populations
J-M267 is very common throughout this region, dominated by J-P58, but some specific sub-populations have notably low frequencies.
Arabian peninsula
This article needs to be updated.(January 2018) |
J-P58 is the most common Y-Chromosome haplogroup among men from all of this region.
Population | Sample size | Total J-M267 | J-M267(xP58) | J-P58 | Publication | Previous research on same samples |
Saudi Arabia | 157 | 40.1% | NA | NA | Abu-Amero 2009 | |
Qatar | 72 | 58.3% | 1.4% | 56.9% | Chiaroni 2009 | Cadenas 2008 |
United Arab Emirates | 164 | 34.8% | 0.0% | 34.8% | Chiaroni 2009 | Cadenas 2008 |
Yemen | 62 | 72.6% | 4.8% | 67.7% | Chiaroni 2009 | Cadenas 2008 |
Kuwait | 117 | 45.2% | NA | NA | [15] | |
Oman | 121 | 38.0% | 0.8% | 37.2% | Chiaroni 2009 | Luis 2004 |
Europe
J-M267 is uncommon in most of Northern and Central Europe. It is, however, found in significant pockets at levels of 5–10% among many populations in southern Europe. A recent study with the extant variation concludes that the Caucasus is likely to be the source of the Greek and Italian haplogroup J1-M267 chromosomes.[16]
Population | Sample size | Total J-M267 | J-M267(xP58) | J-P58 | publication |
Albania | 56 | 3.6% | NA | NA | Semino 2004 |
North Macedonia (Albanian speakers) | 64 | 6.3% | NA | NA | Battaglia 2008 |
Malta | 90 | 7.8% | NA | NA | El-Sibai 2009[17] |
Greece (Crete) | 193 | 8.3% | NA | NA | King 2008 |
Greece (mainland) | 171 | 4.7% | NA | NA | King 2008 |
Greece (Macedonia) | 56 | 1.8% | NA | NA | Semino 2004 |
Greece | 249 | 1.6% | NA | NA | Di Giacomo 2004 |
Bulgaria | 808 | 3.4% | NA | NA | Karachanak 2013 |
Romania | 130 | 1.5% | NA | NA | Di Giacomo 2004 |
Russia | 223 | 0.4% | NA | NA | Di Giacomo 2004 |
Croatia (Osijek Croats) | 29 | 0% | NA | NA | Battaglia 2008 |
Slovenia | 75 | 1.3% | NA | NA | Battaglia 2008 |
Italy (northeast Italians) | 67 | 0% | NA | NA | Battaglia 2008 |
Italy (Italians) | 915 | 0.7% | NA | NA | Capelli 2009 |
Italy (Sicily) | 236 | 3.8% | NA | NA | Di Gaetano 2008 |
France (Provence) | 51 | 2% | NA | NA | King 2011 |
Portugal (North) | 101 | 1% | NA | NA | Gonçalves 2005 |
Portugal (Centre) | 102 | 4.9% | NA | NA | Gonçalves 2005 |
Portugal (South) | 100 | 7% | NA | NA | Gonçalves 2005 |
Portugal (Açores) | 121 | 2.5% | NA | NA | Gonçalves 2005 |
Portugal (Madeira) | 129 | 0% | NA | NA | Gonçalves 2005 |
Caucasus
The Caucasus has areas of both high and low J-M267 frequency. The J-M267 in the Caucasus is also notable because most of it is not within the J-P58 subclade.
Population | Sample size | Total J-M267 | J-M267(xP58) | J-P58 | Publication |
Avars |
115 | 59% | 58% | 1% | Balanovsky 2011 |
Dargins | 101 | 70% | 69% | 1% | Balanovsky 2011 |
Kubachi |
65 | 99% | 99% | 0% | Balanovsky 2011 |
Kaitak |
33 | 85% | 85% | 0% | Balanovsky 2011 |
Lezghins |
81 | 44.4% | 44.4% | 0% | Balanovsky 2011 |
Shapsug |
100 | 0% | 0% | 0% | Balanovsky 2011 |
Abkhaz |
58 | 0% | 0% | 0% | Balanovsky 2011 |
Circassians | 142 | 11.9% | 4.9% | 7% | Balanovsky 2011 |
Ingush | 143 | 2.8% | 2.8% | 0% | Balanovsky 2011 |
Ossetians | 357 | 1.3% | 1.3% | 0.0% | Balanovsky 2011 |
Chechens (Ingushetia) | 112 | 21% | 21% | 0% | Balanovsky 2011 |
Chechens (Chechnya) | 118 | 25% | 25% | 0% | Balanovsky 2011 |
Chechens (Dagestan) | 100 | 16% | 16% | 0% | Balanovsky 2011 |
Azerbaijan | 46 | 15.2% | NA | NA | Di Giacomo 2004 |
Subclade Distribution
J-P58
The P58 marker which defines subgroup J1c3 was announced in (Karafet 2008), but had been announced earlier under the name Page08 in (Repping 2006 and called that again in Chiaroni 2009). It is very prevalent in many areas where J-M267 is common, especially in parts of North Africa and throughout the Arabian peninsula. It also makes up approximately 70% of the J-M267 among the Amhara of Ethiopia. Notably, it is not common among the J-M267 of the Caucasus.
According to this scenario, after the initial neolithic expansion involving
On the other hand, the authors agree that later waves of dispersion in and around this area have also had complex effects upon the distributions of some types of J-P58 in some regions. They list three regions which are particularly important to their proposal:
- The Levant (Syria, Jordan, Israel and Palestine). In this area, Chiaroni 2009 note a "patchy distribution of J1c3 or J-P58 frequency" which is difficult to interpret, and which "may reflect the complex demographic dynamics of religion and ethnicity in the region".
- The Eastern Anatolia, northern Iraq and western Iran. In this area, Chiaroni 2009 recognize signs that J-M267 might have an older presence, and on balance they accept the evidence but note that it could be in error.
- The southern area of Oman, Yemen and Ethiopia. In this area, Chiaroni 2009 recognize similar signs, but reject it as possibly a result of "either sampling variability and/or demographic complexity associated with multiple founders and multiple migrations."
The "YCAII=22-22 and DYS388≥15" cluster
Studies show that J-P58 group is not only in itself very dominant in many areas where J-M267 or J1 are common, but it also contains a large cluster which had been recognized before the discovery of P58. It is still a subject of research though.
This relatively young cluster, compared to J-M267 overall, was identified by
This cluster in turn contains three well-known related sub-clusters. First, it contains the majority of the Jewish "
More recent studies have emphasized doubt that the Islamic expansions are old enough to completely explain the major patterns of J-M267 frequencies. Chiaroni 2009 rejected this for J-P58 as a whole, but accepted that "some of the populations with low diversity, such as Bedouins from Israel, Qatar, Sudan and UAE, are tightly clustered near high-frequency haplotypes suggesting founder effects with star burst expansion in the Arabian Desert". They did not comment on the Maghreb.
Tofanelli 2009 take a stronger position of rejecting any strong correlation between the Arab expansion and either the YCAII=22-22 STR-defined sub-cluster as discussed by Semino 2004 or the smaller "Galilee modal haplotype" as discussed by (Nebel 2002). They also estimate that the Cohen modal haplotype must be older than 4500 years old, and maybe as much as 8600 years old - well before the supposed origin of the Cohanim. Only the "Palestinian & Israeli Arab" modal had a strong correlation to an ethnic group, but it was also rare. In conclusion, the authors were negative about the usefulness of STR defined modals for any "forensic or genealogical purposes" because "they were found across ethnic groups with different cultural or geographic affiliation".
Tofanelli et al. 2014 responded by saying: "In conclusion, while the observed distribution of sub-clades of haplotypes at mitochondrial and Y chromosome non-recombinant genomes might be compatible with founder events in recent times at the origin of Jewish groups as Cohenite, Levite, Ashkenazite, the overall substantial polyphyletism as well as their systematic occurrence in non-Jewish groups highlights the lack of support for using them either as markers of Jewish ancestry or Biblical tales."[18]
J-M368
The correspondence between P58 and high DYS388 values, and YCAII=22-22 is not perfect. For example the J-M267 subclade of J-P58 defined by SNP M368 has DYS388=13 and YCAII=19-22, like other types of J-M267 outside the "Arabic" type of J-M267, and it is therefore believed to be a relatively old offshoot of J-P58, that did not take part in the most recent waves of J-M267 expansion in the Middle East (Chiaroni 2009). These DYS388=13 haplotypes are most common in the Caucasus and Anatolia, but also found in Ethiopia (Tofanelli 2009).
Phylogenetics and distribution
There are several confirmed and proposed phylogenetic trees available for haplogroup J-M267. The following phylogeny or family tree of J-M267 haplogroup subclades is based on the ISOGG (2012) tree, which is in turn based upon the YCC 2008 tree and subsequent published research.
J1 (L255, L321, M267)
- J1* J1* clusters are found in Eastern Anatolia and parts of the Caucasus.
- J1a (M62) Found at very low frequency in Britain.
- J1b (M365.1) Found at low frequency in Eastern Anatolia, Iran, Qatar and parts of Europe.
- J1c (L136)
- J1c* Found at low frequency in Europe.
- J1c1 (M390)
- J1c2 (P56) Found sporadically in Anatolia, East Africa, the Arabian Peninsula and Europe.
- J1c3
- J1c3* Found at low frequency in the Levant and the Arabian Peninsula.
- J1c3a (M367.1, M368.1) Previously known as J1e1.
- J1c3b (M369) Previously known as J1e2.
- J1c3c (L92, L93) Found at low frequency in South Arabia.
- J1c3d (L147.1) Accounts for the majority of J1, the predominant haplogroup in the Arabian peninsula.
- J1c3d* Accounts for the majority of J1 in Yemen, Cohen Jews (both Rabbinical and Karaitic),[19] but missing from Quraysh including Sharif of Makkah of Banu Hashem clan.
- J1c3d1 (L174.1)
- J1c3d2 (L222.2) Accounts for the majority of J1c3d in Saudi Arabia. An important element of J1c3d in North Africa.
- J1c3d2*
- J1c3d2a (L65.2/S159.2)
- J1c3d2*
Ancient DNA
Alalakh Amorite city-state
Five out 12 male individuals from Alalakh who lived between 1930-1325 BC, belonged to haplogroup J1-P58.[20][21]
Arslantepe archaeological complex
One out of 18 male individuals from Arslantepe who lived c. 3491-3122 BC, belonged to haplogroup J1-Z1824.[22][23]
Ancient city of Ebla
Three out of 6 individuals from
Karelia
A member of haplogroup J1-M267 is found among eastern hunter-gatherers from Karelia, Northeast Europe living ~ 8.3 kya. This branch is absent in other ancient European hunter-gatherers. Unfortunately, it is not possible to put this sample in the context of the current haplogroup J1-M267 variation because of the poor quality of the DNA sequence.[3]
Sardinia
Olivieri et al. found a J1c3 haplotype in one of their ancient samples from Sardinia, dated to 6190–6000 calBP.[26]
Satsurblia
An ancient sample of J1 was found at Satsurblia Cave circa 11,000 BC, specifically belonging to the rare J1-FT34521 subclade.[27] The ancient individual from Satsurblia was male with black hair, brown eyes, and light skin.
Tell Kurdu
One out of 4 male individuals from Tell Kurdu who lived circa 5706-5622 BC, belonged to J1-L620.[28][29]
See also
Genetics
- Genetic history of the Middle East
- Genetic history of Europe
- Conversion table for Y chromosome haplogroups
- Genetic Genealogy
- Haplogroup
- Haplotype
- Human Y-chromosome DNA haplogroup
- Molecular phylogenetics
- Paragroup
- Subclade
- Y-chromosomal Aaron
- Y-chromosome haplogroups in populations of the world
- Y-DNA haplogroups in populations of Europe
- Y-DNA haplogroups in populations of East and Southeast Asia
- Y-DNA haplogroups in populations of the Near East
- Y-DNA haplogroups in populations of North Africa
- Y-DNA haplogroups in populations of the Caucasus
- Y-DNA haplogroups by ethnic group
Y-DNA J Subclades
- J-P58
- J-P209
- J-M172
- J-M267
Y-DNA Backbone Tree
References
- PMID 26754573.
- ^ J1
- ^ PMID 33758277.
- ^ Rebai, Ahmed. "Synthetic review on the genetic relatedness between North Africa and Arabia deduced from paternal lineage distributions".
- ^ Rebai, Ahmed. "Synthetic review on the genetic relatedness between North Africa and Arabia deduced from paternal lineage distributions".
- PMID 19826455.
- S2CID 205303372.
- PMID 24312208.
- S2CID 12893406.
- PMID 19934469. Archived from the original(PDF) on 28 March 2012. Retrieved 9 October 2022.
- PMID 23431392.
- S2CID 25186140.
- PMID 19809480.
- PMID 22815981.
- .
- PMID 29748665.
- ^ El-Sibai et al.,2009, Percentage of haplogroups
- PMID 25431579.
- .
- ^ "J-P58 YTree".
- S2CID 219105572.
- ^ "J-Z1842 YTree".
- S2CID 219105572.
- ^ "J-P58 YTree".
- S2CID 219105572.
- PMID 28177087.
- ^ "J-Y6313 YTree".
- ^ "J-L620 YTree".
- S2CID 219105572.
Footnotes
Works cited
Journals
- Moran, CN; Scott RA; Adams SM; Warrington SJ; Jobling MA; Wilson RH; Goodwin WH; Georgiades E; Wolde B; Pitsiladis YP. (Nov 2004). "Y chromosome haplogroups of elite Ethiopian endurance runners". Human Genetics. 115 (6): 492–7. S2CID 13960753.
- Abu-Amero, Khaled K; Hellani, Ali; González, Ana M; Larruga, Jose M; Cabrera, Vicente M; Underhill, Peter A (2009). "Saudi Arabian Y-Chromosome diversity and its relationship with nearby regions". BMC Genetics. 10 (1): 59. PMID 19772609.
- Alvarez, Luis; Santos, Cristina; Montiel, Rafael; Caeiro, Blazquez; Baali, Abdellatif; Dugoujona, Jean-Michel; Aluja, Maria Pilar (2009). "Y-chromosome variation in South Iberia: insights into the North African contribution". American Journal of Human Biology. 21 (3): 407–9. S2CID 7041905.
- Arredi, B; Poloni, E; Paracchini, S; Zerjal, T; Fathallah, D; Makrelouf, M; Pascali, V; Novelletto, A; Tyler-Smith, C (2004). "A predominantly neolithic origin for Y-chromosomal DNA variation in North Africa". American Journal of Human Genetics. 75 (2): 338–45. PMID 15202071.
- Balanovsky, O.; Dibirova, K.; Dybo, A.; Mudrak, O.; Frolova, S.; Pocheshkhova, E.; Haber, M.; Platt, D.; et al. (2011). "Parallel evolution of genes and languages in the Caucasus region". Molecular Biology and Evolution. 28 (10): 2905–20. PMID 21571925.
- Battaglia, Vincenza; Fornarino, Simona; Al-Zahery, Nadia; Olivieri, Anna; Pala, Maria; Myres, Natalie M; King, Roy J; Rootsi, Siiri; et al. (2009). "Y-chromosomal evidence of the cultural diffusion of agriculture in southeast Europe". European Journal of Human Genetics. 17 (6): 820–30. PMID 19107149.
- Bosch, Elena; Calafell, Francesc; Comas, David; Oefner, Peter J.; Underhill, Peter A.; Bertranpetit, Jaume (April 2001). "High-Resolution Analysis of Human Y-Chromosome Variation Shows a Sharp Discontinuity and Limited Gene Flow between Northwestern Africa and the Iberian Peninsula". The American Journal of Human Genetics. 68 (4): 1019–1029. PMID 11254456.
- Cadenas, Alicia M; Zhivotovsky, Lev A; Cavalli-Sforza, Luca L; Underhill, Peter A; Herrera, Rene J (2008). "Y-chromosome diversity characterizes the Gulf of Oman". European Journal of Human Genetics. 16 (3): 374–86. PMID 17928816.
- Cann, H. M. (2002). "A Human Genome Diversity Cell Line Panel". Science. 296 (5566): 261–262. S2CID 41595131.
- Capelli, Cristian; Onofri, Valerio; Brisighelli, Francesca; Boschi, Ilaria; Scarnicci, Francesca; Masullo, Mara; Ferri, Gianmarco; Tofanelli, Sergio; et al. (2009). "Moors and Saracens in Europe: estimating the medieval North African male legacy in southern Europe". European Journal of Human Genetics. 17 (6): 848–52. PMID 19156170.
- Chiaroni, J; King, Roy J; Underhill, Peter A (2008). "Correlation of annual precipitation with human Y-chromosome diversity and the emergence of Neolithic agricultural and pastoral economies in the Fertile Crescent". Antiquity. 82 (316): 281–289. S2CID 163297133.
- Chiaroni, Jacques; King, Roy J; Myres, Natalie M; Henn, Brenna M; Ducourneau, Axel; Mitchell, Michael J; Boetsch, Gilles; Sheikha, Issa; et al. (2010). "The emergence of Y-chromosome haplogroup J1e among Arabic-speaking populations". European Journal of Human Genetics. 18 (3): 348–353. PMID 19826455.
- Cinnioğlu, Cengiz; King, Roy; Kivisild, Toomas; Kalfoğlu, Ersi; Atasoy, Sevil; Cavalleri, Gianpiero L; Lillie, Anita S.; Roseman, Charles C; et al. (2004). "Excavating Y-chromosome haplotype strata in Anatolia". Human Genetics. 114 (2): 127–148. S2CID 10763736.
- Di Gaetano, Cornelia; Cerutti, Nicoletta; Crobu, Francesca; Robino, Carlo; Inturri, Serena; Gino, Sarah; Guarrera, Simonetta; Underhill, Peter A; et al. (2009). "Differential Greek and northern African migrations to Sicily are supported by genetic evidence from the Y chromosome". European Journal of Human Genetics. 17 (1): 91–99. PMID 18685561.
- El-Sibai, Mirvat; Platt, Daniel E.; Haber, Marc; Xue, Yali; Youhanna, Sonia C.; Wells, R. Spencer; Izaabel, Hassan; Sanyoura, May F.; et al. (2009). "Geographical structure of the Y-chromosomal genetic landscape of the Levant: a coastal-inland contrast". Annals of Human Genetics. 73 (Pt 6): 568–581. PMID 19686289.
- Ennafaa, Hajer; Fregel, Rosa; Khodjet-El-Khil, Houssein; González, Ana M; Mahmoudi, Hejer Abdallah El; Cabrera, Vicente M; Larruga, José M; Benammar-Elgaaïed, Amel (2011). "Mitochondrial DNA and Y-chromosome microstructure in Tunisia". Journal of Human Genetics. 56 (10): 734–741. PMID 21833004.
- Fadhlaoui-Zid, Karima; Martinez-Cruz, Begoña; Khodjet-El-Khil, Houssein; Mendizabal, Isabel; Benammar-Elgaaïed, Amel; Comas, David (2011). "Genetic structure of Tunisian ethnic groups revealed by paternal lineages". American Journal of Physical Anthropology. 146 (2): 271–280. PMID 21915847.
- Flores, Carlos; Maca-Meyer, Nicole; Peŕez, Jose A.; Cabrera, Vicente M. (September 2001). "The peopling of the Canary Islands: a CD4/Alu microsatellite haplotype perspective". Human Immunology. 62 (9): 949–953. PMID 11543897.
- Flores, Carlos; Maca-Meyer, Nicole; Larruga, Jose M.; Cabrera, Vicente M.; Karadsheh, Naif; Gonzalez, Ana M. (2005). "Isolates in a corridor of migrations: a high-resolution analysis of Y-chromosome variation in Jordan". Journal of Human Genetics. 50 (9): 435–441. PMID 16142507.
- Fregel, Rosa; Gomes, Verónica; Gusmão, Leonor; González, Ana M; Cabrera, Vicente M; Amorim, António; Larruga, Jose M (2009). "Demographic history of Canary Islands male gene-pool: replacement of native lineages by European". BMC Evolutionary Biology. 9 (1): 181. PMID 19650893.
- Di Giacomo, F.; Luca, F.; Popa, L. O.; Akar, N.; Anagnou, N.; Banyko, J.; Brdicka, R.; Barbujani, G.; et al. (2004). "Y chromosomal haplogroup J as a signature of the post-neolithic colonization of Europe". Human Genetics. 115 (5): 357–371. S2CID 18482536.
- Gonçalves, Rita; Freitas, Ana; Branco, Marta; Rosa, Alexandra; Fernandes, Ana T.; Zhivotovsky, Lev A.; Underhill, Peter A.; Kivisild, Toomas; Brehm, Antonio (2005). "Y-chromosome lineages from Portugal, Madeira and Açores record elements of Sephardim and Berber ancestry". Annals of Human Genetics. 69 (Pt 4): 443–454. S2CID 3229760.
- Hammer, Michael F.; Behar, Doron M.; Karafet, Tatiana M.; Mendez, Fernando L.; Hallmark, Brian; Erez, Tamar; Zhivotovsky, Lev A.; Rosset, Saharon; Skorecki, Karl (2009). "Extended Y chromosome haplotypes resolve multiple and unique lineages of the Jewish priesthood". Human Genetics. 126 (5): 707–717. PMID 19669163.
- Hassan, Hisham Y.; Underhill, Peter A.; Cavalli-Sforza, Luca L.; Ibrahim, Muntaser E. (2008). "Y-chromosome variation among Sudanese: restricted gene flow, concordance with language, geography, and history". American Journal of Physical Anthropology. 137 (3): 316–323. PMID 18618658.
- Karachanak, Sena; Grugni, Viola; Fornarino, Simona; Nesheva, Desislava; Al-Zahery, Nadia; Battaglia, Vincenza; Carossa, Valeria; Yordanov, Yordan; Torroni, Antonio; Galabov, Angel S.; Toncheva, Draga; Semino, Ornella (6 March 2013). "Y-Chromosome Diversity in Modern Bulgarians: New Clues about Their Ancestry". PLOS ONE. 8 (3): e56779. PMID 23483890.
- Karafet, T. M.; Mendez, F. L.; Meilerman, M. B.; Underhill, Peter A.; Zegura, S. L.; Hammer, M. F. (2008). "New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree". Genome Research. 18 (5): 830–838. PMID 18385274. See also Supplementary Material.
- King, R; Underhill, Peter A (2002). "Congruent distribution of Neolithic painted pottery and ceramic figurines with Y-chromosome lineages". Antiquity. 76 (293): 707–714. S2CID 160359661.
- King, R. J.; Özcan, S. S.; Carter, T.; Kalfoğlu, E.; Atasoy, S.; Triantaphyllidis, C.; Kouvatsi, A.; Lin, A. A.; et al. (2008). "Differential Y-chromosome Anatolian influences on the Greek and Cretan Neolithic". Annals of Human Genetics. 72 (Pt 2): 205–214. S2CID 22406638.
- King, Roy J; Di Cristofaro, Julie; Kouvatsi, Anastasia; Triantaphyllidis, Costas; Scheidel, Walter; Myres, Natalie M; Lin, Alice A; Eissautier, Alexandre; Mitchell, Michael; Binder, Didier; Semino, Ornella; Novelletto, Andrea; Underhill, Peter A; Chiaroni, Jacques (December 2011). "The coming of the Greeks to Provence and Corsica: Y-chromosome models of archaic Greek colonization of the western Mediterranean". BMC Evolutionary Biology. 11 (1): 69. PMID 21401952.
- Kujanová, Martina; Pereira, Luísa; Fernandes, Verónica; Pereira, Joana B.; Černý, Viktor (2009). "Near eastern neolithic genetic input in a small oasis of the Egyptian Western Desert". American Journal of Physical Anthropology. 140 (2): 336–46. PMID 19425100.
- Luis, J; Rowold, D; Regueiro, M; Caeiro, B; Cinnioğlu, C; Roseman, C; Underhill, P; Cavalli-Sforza, L; Herrera, R (2004). "The Levant versus the Horn of Africa: evidence for bidirectional corridors of human migrations". The American Journal of Human Genetics. 74 (3): 532–544. )
- Msaidie, Said; Ducourneau, Axel; Boetsch, Gilles; Longepied, Guy; Papa, Kassim; Allibert, Claude; Yahaya, Ali Ahmed; Chiaroni, Jacques; Mitchell, Michael J (2011). "Genetic diversity on the Comoros Islands shows early seafaring as major determinant of human biocultural evolution in the Western Indian Ocean". European Journal of Human Genetics. 19 (1): 89–94. PMID 20700146.
- Nebel, A; Filon, D; Weiss, DA; Weale, M; Faerman, M; Oppenheim, A; Thomas, MG (2000). "High-resolution Y chromosome haplotypes of Israeli and Palestinian Arabs reveal geographic substructure and substantial overlap with haplotypes of Jews". Hum. Genet. 107 (6): 630–641. S2CID 8136092.
- Nebel, A; Filon, D; Brinkmann, B; Majumder, P; Faerman, M; Oppenheim, A (2001). "The Y chromosome pool of Jews as part of the genetic landscape of the Middle East". American Journal of Human Genetics. 69 (5): 1095–1112. PMID 11573163.
- Nebel, A; Landau-Tasseron, E; Filon, D; Oppenheim, A; Faerman, M (2002). "Genetic evidence for the expansion of Arabian tribes into the Southern Levant and North Africa". American Journal of Human Genetics. 70 (6): 1594–1596. PMID 11992266.
- Nogueiro, I.; Manco, L.; Gomes, V.; Amorim, A.; Gusmão, L. (2010). "Phylogeographic analysis of paternal lineages in NE Portuguese Jewish communities". American Journal of Physical Anthropology. 141 (3): 373–381. PMID 19918998.
- Onofri, Valerio; Alessandrini, Federica; Turchi, Chiara; Pesaresi, Mauro; Tagliabracci, Adriano (2008). "Y-chromosome markers distribution in Northern Africa: High-resolution SNP and STR analysis in Tunisia and Morocco populations". Forensic Science International: Genetics Supplement Series. 1: 235–236. .
- Ottoni, Claudio; Larmuseau, Maarten H.D.; Vanderheyden, Nancy; Martínez-Labarga, Cristina; Primativo, Giuseppina; Biondi, Gianfranco; Decorte, Ronny; Rickards, Olga (2011). "Deep into the roots of the Libyan Tuareg: A genetic survey of their paternal heritage". American Journal of Physical Anthropology. 145 (1): 118–124. PMID 21312181.
- Regueiro, M.; Cadenas, A.M.; Gayden, T.; Underhill, P.A.; Herrera, R.J. (2006). "Iran: tricontinental nexus for Y-chromosome driven migration". Human Heredity. 61 (3): 132–143. S2CID 7017701.
- Repping, S; van Daalen, SK; Brown, LG; Korver, Cindy M; Lange, Julian; Marszalek, Janet D; Pyntikova, Tatyana; van der Veen, Fulco; et al. (2006). "High mutation rates have driven extensive structural polymorphism among human Y chromosomes". Nat Genet. 38 (4): 463–467. S2CID 17083896.
- Robino, C.; Crobu, F.; Di Gaetano, C.; Bekada, A.; Benhamamouch, S.; Cerutti, N.; Piazza, A.; Inturri, S.; Torre, C. (2008). "Analysis of Y-chromosomal SNP haplogroups and STR haplotypes in an Algerian population sample". International Journal of Legal Medicine. 122 (3): 251–255. S2CID 11556974.
- Semino, Ornella; Magri, Chiara; Benuzzi, Giorgia; Lin, Alice A.; Al-Zahery, Nadia; Battaglia, Vincenza; Maccioni, Liliana; Triantaphyllidis, Costas; et al. (2004). "Origin, diffusion, and differentiation of Y-chromosome haplogroups E and J: inferences on the neolithization of Europe and later migratory events in the Mediterranean area". American Journal of Human Genetics. 74 (5): 1023–1034. PMID 15069642.
- Sengupta, Sanghamitra; Zhivotovsky, Lev A.; King, Roy; Mehdi, S.Q; Edmonds, Christopher A.; Chow, Cheryl-Emiliane T.; Lin, Alice A.; Mitra, Mitashree; et al. (2006). "Polarity and temporality of high-resolution y-chromosome distributions in India identify both indigenous and exogenous expansions and reveal minor genetic influence of Central Asian pastoralists". American Journal of Human Genetics. 78 (2): 202–221. PMID 16400607.
- Shen, Peidong; Lavi, Tal; Kivisild, Toomas; Chou, Vivian; Sengun, Deniz; Gefel, Dov; Shpirer, Issac; Woolf, Eilon; et al. (2004). "Reconstruction of patrilineages and matrilineages of Samaritans and other Israeli populations from Y-chromosome and mitochondrial DNA sequence variation". Human Mutation. 24 (3): 248–260. S2CID 1571356.
- Shlush, Liran I.; Behar, Doron M.; Yudkovsky, Guennady; Templeton, Alan; Hadid, Yarin; Basis, Fuad; Hammer, Michael; Itzkovitz, Shalev; Skorecki, Karl (2008). "The Druze: a population genetic refugium of the Near East". PLOS ONE. 3 (5): e2105. PMID 18461126.
- Tofanelli, Sergio; Ferri, Gianmarco; Bulayeva, Kazima; Caciagli, Laura; Onofri, Valerio; Taglioli, Luca; Bulayev, Oleg; Boschi, Ilaria; et al. (2009). "J1-M267 Y lineage marks climate-driven pre-historical human displacements". European Journal of Human Genetics. 17 (11): 1520–1524. PMID 19367321.
- Y Chromosome Consortium "YCC" (2002). "A Nomenclature System for the Tree of Human Y-Chromosomal Binary Haplogroups". Genome Research. 12 (2): 339–48. PMID 11827954.
- Zalloua, Pierre A.; Xue, Yali; Khalife, Jade; Makhoul, Nadine; Debiane, Labib; Platt, Daniel E.; Royyuru, Ajay K.; Herrera, Rene J.; et al. (2008). "Y-chromosomal diversity in Lebanon is structured by recent historical events". American Journal of Human Genetics. 82 (4): 873–882. PMID 18374297.
- Zalloua, Pierre A.; Platt, Daniel E.; El Sibai, Mirvat; Khalife, Jade; Makhoul, Nadine; Haber, Marc; Xue, Yali; Izaabel, Hassan; et al. (2008). "Identifying Genetic Traces of Historical Expansions: Phoenician Footprints in the Mediterranean". American Journal of Human Genetics. 83 (5): 633–642. PMID 18976729.
Websites
Haplogroups/Phylogeny
- ISOGG; Schrack, Janzen (2013). "Y-DNA Haplogroup J and its Subclades". International Society of Genetic Genealogists "ISOGG". Ongoing Corrections/Additions by citizen scientists.
Haplotype/SNP research Projects. See also Y-DNA haplogroup projects (ISOGG Wiki)
- Schrack; Janzen; Rottensteiner; Ricci; Mas (2013). "Y-DNA J Haplogroup Project". Family Tree DNA. This is an ongoing research project by citizen scientists. Over 2300 members.
- Givargidze; Hrechdakian (2013). "J1* Y-DNA Project". Family Tree DNA. This is an ongoing research project by citizen scientists. Over 150 members.
- Al Haddad (2013). "J1c3 (J-L147)". Family Tree DNA. This is an ongoing research project by citizen scientists. Over 550 members.
- Cone; Al Gazzah; Sanders (2013). "J-M172 Y-DNA Project (J2)". Family Tree DNA. This is an ongoing research project by citizen scientists. Over 1050 members.
- Aburto; Katz; Al Gazzah; Janzen (2013). "J-L24-Y-DNA Haplogroup Project (J2a1h)". Family Tree DNA. This is an ongoing research project by citizen scientists. Over 450 members.
Haplogroup-Specific Ethnic/Geographical Group Projects
- Eddali (2013). "Arab Tribes". Family Tree DNA. This is an ongoing research project by citizen scientists. Over 950 J members.
- Al Gazzah (2013). "J2-Middle East Project مشروع سلالة ج2 في العالم العربي والشرق الأوسط". Family Tree DNA. This is an ongoing research project by citizen scientists. Over 400 members.
Further reading
- Behar, Doron M.; Thomas, Mark G.; Skorecki, Karl; Hammer, Michael F.; Bulygina, Ekaterina; Rosengarten, Dror; Jones, Abigail L.; Held, Karen; et al. (2003). "Multiple Origins of Ashkenazi Levites: Y Chromosome Evidence for Both Near Eastern and European Ancestries". The American Journal of Human Genetics. 73 (4): 768–79. PMID 13680527.
- Behar, Doron M.; Garrigan, Daniel; Kaplan, Matthew E.; Mobasher, Zahra; Rosengarten, Dror; Karafet, Tatiana M.; Quintana-Murci, Lluis; Ostrer, Harry; et al. (2004). "Contrasting patterns of Y chromosome variation in Ashkenazi Jewish and host non-Jewish European populations". Human Genetics. 114 (4): 354–65. S2CID 10310338.
- Firasat, Sadaf; Khaliq, Shagufta; Mohyuddin, Aisha; Papaioannou, Myrto; Tyler-Smith, Chris; Underhill, Peter A; Ayub, Qasim (2006). "Y-chromosomal evidence for a limited Greek contribution to the Pathan population of Pakistan". European Journal of Human Genetics. 15 (1): 121–6. PMID 17047675.
- Flores, Carlos; Maca-Meyer, Nicole; González, Ana M; Oefner, Peter J; Shen, Peidong; Pérez, Jose A; Rojas, Antonio; Larruga, Jose M; Underhill, Peter A (2004). "Reduced genetic structure of the Iberian peninsula revealed by Y-chromosome analysis: Implications for population demography". European Journal of Human Genetics. 12 (10): 855–63. PMID 15280900.
- Semino, O.; Passarino, G; Oefner, PJ; Lin, AA; Arbuzova, S; Beckman, LE; De Benedictis, G; Francalacci, P; et al. (2000). "The Genetic Legacy of Paleolithic Homo sapiens sapiens in Extant Europeans: A Y Chromosome Perspective". Science. 290 (5494): 1155–9. PMID 11073453.
Phylogenetic Notes
- ^ This table shows the historic names for J-M267 and its earlier discovered and named subclade J-M62 in published peer reviewed literature.
YCC 2002/2008 (Shorthand) J-M267 J-M62 Jobling and Tyler-Smith 2000 - 9 Underhill 2000 - VI Hammer 2001 - Med Karafet 2001 - 23 Semino 2000 - Eu10 Su 1999 - H4 Capelli 2001 - B YCC 2002 (Longhand) - J1 YCC 2005 (Longhand) J1 J1a YCC 2008 (Longhand) J1 J1a YCC 2010r (Longhand) J1 J1a - ^ This table shows the historic names for J-P209 (AKA J-12f2.1 or J-M304) in published peer reviewed literature. Note that in Semino 2000 Eu09 is a subclade of Eu10 and in Karafet 2001 24 is a subclade of 23.
YCC 2002/2008 (Shorthand) J-P209
(AKA J-12f2.1 or J-M304)Jobling and Tyler-Smith 2000 9 Underhill 2000 VI Hammer 2001 Med Karafet 2001 23 Semino 2000 Eu10 Su 1999 H4 Capelli 2001 B YCC 2002 (Longhand) J* YCC 2005 (Longhand) J YCC 2008 (Longhand) J YCC 2010r (Longhand) J