Haplogroup R1
Haplogroup R1 | |
---|---|
Ancestor | R (R-M207) |
Descendants | R1a (M420), R1b (M343) |
Defining mutations | M173/P241/Page29, CTS916/M611/PF5859, CTS997/M612/PF6111, CTS1913/M654, CTS2565/M663, CTS2680, CTS2908/M666/PF6123, CTS3123/M670, CTS3321/M673, CTS4075/M682, CTS5611/M694, CTS7085/M716/Y481, CTS8116/M730, F93/M621/PF6114, F102/M625/PF6116, F132/M632, F211/Y290, F245/M659/Y477, FGC189/Y305, L875/M706/PF6131/YSC0000288, L1352/M785/YSC0000230, M306/PF6147/S1, M640/PF6118, M643, M689, M691/CTS4862/PF6042/YSC0001281, M710/PF6132/YSC0000192, M748/YSC0000207, M781, P225, P231, P233, P234, P236, P238/PF6115, P242/PF6113, P245/PF6117, P286/PF6136, P294/PF6112, PF6120[4] |
Haplogroup R1, or R-M173, is a Y-chromosome DNA haplogroup. A primary subclade of Haplogroup R (R-M207), it is defined by the SNP M173. The other primary subclade of Haplogroup R is Haplogroup R2 (R-M479).
Males carrying R-M173 in modern populations appear to comprise two subclades: R1a and R1b, which are found mainly in populations native to Eurasia (except East and Southeast Asia). R-M173 contains the majority of representatives of haplogroup R in the form of its subclades, R1a and R1b (Rosser 2000, Semino 2000).
Structure
Haplogroup R1 | ||||||||||||||||||||||||
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Origins
R1 and its sibling clade R2 (R-M79) are the only immediate descendants of
No examples of the
General distribution
Eurasia
Haplogroup R1 is very common throughout all of
Individuals whose Y-chromosomes possess all the mutations on internal nodes of the Y-DNA tree down to and including M207 (which defines
Americas
The presence of haplogroup R1 among
Some authorities point to the greater similarity between haplogroup R1 subclades found in North America and those found in Siberia (e.g. Lell [11] and Raghavan [12]), suggesting prehistoric immigration from Asia and/or Beringia.
Africa
One subclade, now known as R1b1a2 (R-V88), is found only at high frequencies amongst populations native to
Subclade distribution
R1a (R-M420)
The split of R1a (M420) is computed to ca 25,000 years ago (95% CI: 21, 300–29, 000 BP), or roughly the
R1b (R-M343)
Haplogroup R1b probably originated in Eurasia prior to or during the last glaciation. It is the most common haplogroup in Western Europe and Bashkortostan.(Lobov 2009) It may have survived the last glacial maximum,[19] in refugia near the southern Ural Mountains and Aegean Sea.(Lobov 2009).
It is also present at lower frequencies throughout Eastern Europe, with higher diversity than in western Europe, suggesting an ancient migration of haplogroup R1b from the east.[20] Haplogroup R1b is also found at various frequencies in many different populations near the Ural Mountains and Central Asia, its likely region of origin.
There may be a correlation between this haplogroup and the spread of
Although it is rare in
R-M343 (previously called Hg1[citation needed] and Eu18[citation needed]) is the most frequent Y-chromosome haplogroup in Europe. It is an offshoot of R-M173, characterised by the M343 marker.[25] An overwhelming majority of members of R-M343 are classified as R-P25 (defined by the P25 marker), the remainder as R-M343*. Its frequency is highest in Western Europe (and due to modern European immigration, in parts of the Americas). The majority of R-M343-carriers of European descent belong to the R-M269 (R1b1a2) descendant line.
See also
Genetics
- Genetic history of the Middle East
- Conversion table for Y chromosome haplogroups
- Genetic Genealogy
- Haplogroup
- Haplotype
- Human Y-chromosome DNA haplogroup
- Molecular Phylogeny
- Paragroup
- Subclade
- Y-chromosomal Aaron
- Y-chromosome haplogroups in populations of the world
- Y-DNA haplogroups by ethnic group
- Y-DNA haplogroups in populations of South Asia
- Y-DNA haplogroups in populations of East and Southeast Asia
- Y-DNA haplogroups in populations of the Near East
- Y-DNA haplogroups in populations of North Africa
- Y-DNA haplogroups in populations of the Caucasus
Y-DNA R-M207 subclades
- R-L21
- R-L295
- R-M124
- R-M167
- R-M17
- R-M173
- R (R-M207)
- R-M342
- R-M420
- R-M479
- R-U106
References
- ^ Kivisild 2003
- ^ Soares 2010
- ^ (Wells 2001) [dead link]
- ^ Y-DNA Haplogroup R and its Subclades – 2008 from ISOGG
- ^ "SNP Tracker".
- S2CID 196643946.
- PMID 33523926.
- PMID 27135931.
- PMID 25731166.
- ^ "Results for R1b1 members". Archived from the original on 13 March 2009. Retrieved 27 December 2019.
- PMID 11731934.
- PMID 24256729.
- PMID 24667786
- ^ Underhill 2014, p. 130.
- ^ a b c Pamjav 2012.
- ^ Underhill 2014.
- ^ a b Miroslava Derenko et al 2005, Contrasting patterns of Y-chromosome variation in South Siberian populations from Baikal and Altai-Sayan regions Archived 30 March 2022 at the Wayback Machine
- S2CID 566825
- S2CID 11556974.
- ^ "Variations of R1b Ydna in Europe: Distribution and Origins | WorldFamilies.net". www.worldfamilies.net. Retrieved 27 December 2019.
- ^ Most Euro men are related to King Tut: DNA testing reveals strange genetic link among Europeans; Oddly, most Egyptians not in the family, Metro NY, 2 August 2011, archived from the original on 23 March 2012, retrieved 14 September 2011
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ignored (help) - ^ "With a sample population of 105 Filipinos, the company of Applied Biosystems, analysed the Y-DNA of average Filipinos and it is discovered that about 0.95% of the samples have the Y-DNA Haplotype "H1a", which is most common in South Asia and had spread to the Philippines via precolonial Indian missionaries who spread Hinduism and established Indic Rajahnates like Cebu and Butuan. The 13% frequeny of R1b also indicate Spanish admixture". Archived from the original on 25 May 2017. Retrieved 20 October 2021.
- ^ "Manual Collation". Archived from the original on 26 October 2022. Retrieved 26 October 2022.
- ^ Philippines DNA Project Archived 4 February 2023 at the Wayback Machine - Y-DNA Classic Chart
- ^ Note that in earlier literature the M269 marker, rather than M343, was used to define the "R1b" haplogroup. Then, for a time (from 2003 to 2005) what is now R1b1c was designated R1b3.
Works cited
- Gayden, T; Cadenas, AM; Regueiro, M; Singh, NB; Zhivotovsky, LA; Underhill, PA; Cavalli-Sforza, LL; Herrera, RJ (2007), "The Himalayas as a directional barrier to gene flow.", American Journal of Human Genetics, 80 (5): 884–94, PMID 17436243
- Behar; Thomas, MG; Skorecki, K; Hammer, MF; Bulygina, E; Rosengarten, D; Jones, AL; Held, K; Moses, V (2003), "Multiple Origins of Ashkenazi Levites: Y Chromosome Evidence for Both Near Eastern and European Ancestries" (PDF), Am. J. Hum. Genet., vol. 73, no. 4, pp. 768–779, PMID 13680527
- Luigi Luca Cavalli-Sforza (1994), The History and Geography of Human Genes, Princeton University Press, ISBN 978-0-691-08750-4
- Cinnioğlu, C; et al. (2004), "Excavating Y-chromosome haplotype strata in Anatolia", Hum Genet, 114 (2): 127–48, S2CID 10763736
- Firasat, S.; Khaliq, S.; Mohyuddin, A.; Papaioannou, M.; Tyler-Smith, C.; Underhill, P. A.; Ayub, Q. (2007). "Y-chromosomal evidence for a limited Greek contribution to the Pathan population of Pakistan". European Journal of Human Genetics. 15 (1): 121–26. PMID 17047675.
- Kivisild, T.; Rootsi, S.; Metspalu, M.; Mastana, S.; Kaldma, K.; Parik, J.; Metspalu, E.; Adojaan, M.; Tolk, H.-V.; Stepanov, V.; Gölge, M.; Usanga, E.; Papiha, S. S.; Cinnioğlu, C.; King, R.; Cavalli-Sforza, L.; Underhill, P. A.; Villems, R. (2003). "The Genetic Heritage of the Earliest Settlers Persists Both in Indian Tribal and Caste Populations". American Journal of Human Genetics. 72 (2): 313–332. PMID 12536373.
- Lobov AS, et al. (2009). "Structure of the Gene Pool of Bashkir Subpopulations" (PDF) (in Russian). Archived from the original (PDF) on 16 August 2011.
- Pamjav (December 2012), "Brief communication: New Y-chromosome binary markers improve phylogenetic resolution within haplogroup R1a1", American Journal of Physical Anthropology, 149 (4): 611–615, PMID 23115110
- Passarino; et al. (2002), "Different genetic components in the Norwegian population revealed by the analysis of mtDNA and Y chromosome polymorphisms", Eur. J. Hum. Genet., vol. 10, no. 9, pp. 521–9, PMID 12173029
- Saha; et al. (2005), "Genetic affinity among five different population groups in India reflecting a Y-chromosome gene flow", J. Hum. Genet., vol. 50, no. 1, pp. 49–51, PMID 15611834
- Semino; et al. (2000), "The Genetic Legacy of Paleolithic Homo sapiens sapiens in Extant Europeans" (PDF), Science, vol. 290, no. 5494, pp. 1155–9, PMID 11073453, archived from the original(PDF) on 25 November 2003
- Sengupta; et al. (2005), "Polarity and Temporality of High-Resolution Y-Chromosome Distributions in India Identify Both Indigenous and Exogenous Expansions and Reveal Minor Genetic Influence of Central Asian Pastoralists", Am. J. Hum. Genet., vol. 78, no. 2, pp. 202–21, PMID 16400607
- Sharma, Swarkar; Rai, Ekta; Bhat, Audesh K; Bhanwer, Amarjit S; Bamezai, Rameshwar NK (2007). "A novel subgroup Q5 of human Y-chromosomal haplogroup Q in India". BMC Evolutionary Biology. 7 (1): 232. PMID 18021436.
- Soares; et al. (2010), "The Archaeogenetics of Europe", Current Biology, 20 (4): R174–83, S2CID 7679921
- Wells; et al. (2001), "The Eurasian Heartland: A continental perspective on Y-chromosome diversity", Proc. Natl. Acad. Sci. U.S.A., vol. 98, no. 18, pp. 10244–9,
- Rosser ZH, Zerjal T, Hurles ME, Adojaan M, Alavantic D, Amorim A, Amos W, Armenteros M, et al. (2000). "Y-Chromosomal Diversity in Europe Is Clinal and Influenced Primarily by Geography, Rather than by Language". PMID 11078479.