Hepacivirus
Hepacivirus | |
---|---|
Hepacivirus structure and genome | |
Virus classification | |
(unranked): | Virus |
Realm: | Riboviria |
Kingdom: | Orthornavirae |
Phylum: | Kitrinoviricota |
Class: | Flasuviricetes |
Order: | Amarillovirales |
Family: | Flaviviridae |
Genus: | Hepacivirus |
Synonyms | |
Hepacivirus is a genus of
History
Hepatitis C virus (HCV), which is the causative agent of hepatitis C in humans, and a member of the species Hepacivirus C, was discovered in 1989.[5] Seven genotypes (1–7) and eighty-six subtypes (1a, 1b etc.) of hepatitis C virus have been named.[6]
GBV-B virus (also known as GB virus B) discovered in 1995 is capable of infecting
Structure
Viruses in the genus Hepacivirus are enveloped and have spherical icosahedral-like geometries with pseudo T=3 symmetry. The virus particle diameter is around 50 nm. Genomes are linear, non-segmented, and around 10,000 nucleotides in length.[3][4]
Life cycle
Entry into the host cell is achieved by attachment of the viral envelope protein E to host receptors, which mediates clathrin-mediated endocytosis. Replication follows the positive-strand RNA virus replication model. Positive strand RNA virus transcription is the method of transcription. Translation takes place by viral initiation. Humans and other vertebrate serve as the natural host. Transmission routes are sexual, blood, and contact.[3][4]
Genus | Host details | Tissue tropism | Entry details | Release details | Replication site | Assembly site | Transmission |
---|---|---|---|---|---|---|---|
Hepacivirus | Humans | Epithelium: skin; epithelium: kidney; epithelium: intestine; epithelium: testes | Clathrin-mediated endocytosis | Secretion | Cytoplasm | Cytoplasm | Sex; blood |
Taxonomy
In the genus Hepacvirus there are 14 species:[7][3]
- canine hepacivirus, equine hepacivirus)
- Hepacivirus B (GBV-B)
- Hepacivirus C(hepatitis C virus)
- Hepacivirus D (Guereza hepacivirus)
- Hepacivirus E (rodent hepacivirus-339)
- Hepacivirus F (rodent hepacivirus-NLR07-oct70)
- Hepacivirus G (Norway rat hepacivirus 1)
- Hepacivirus H (Norway rat hepacivirus 2)
- Hepacivirus I (rodent hepacivirus-SAR-3/RSA/2008)
- Hepacivirus J (rodent hepacivirus-RMU10-3382/GER/2010)
- Hepacivirus K (bat hepacivirus-PDB-829)
- Hepacivirus L (bat hepacivirus-PDB-112)
- Hepacivirus M (bat hepacivirus-PDB-491.1)
- Hepacivirus N (bovine hepacivirus)
Additional information
Additional hepaciviruses have been described from bats, rodents including bank voles, horses, and dogs.
Cattle are a host for viruses of the species Hepacivirus N.[13][14] The viruses most closely related to Hepacivirus C are the equine hepaciviruses of the species Hepacivirus A.[15] There are at least two subtypes of equine hepacivirus.[16] Hepacivirus A infecting horses has also been found in donkeys.[17]
A virus related to the hepaciviruses has been isolated from bald eagles (
References
- PMID 8992952. Retrieved 13 March 2019.
To name the genus comprising the hepatitis C-like viruses as the genus Hepacivirus.
- ^ 1ICTV 6th Report Murphy, F. A., Fauquet, C. M., Bishop, D. H. L., Ghabrial, S. A., Jarvis, A. W. Martelli, G. P. Mayo, M. A. & Summers, M. D.(eds)(1995). Virus Taxonomy. Sixthreport of the International Committee on Taxonomy of Viruses. Archives of Virology Supplement 10, p. 424 https://ictv.global/ictv/proposals/ICTV%206th%20Report.pdf
- ^ a b c d e f "Flaviviridae". International Committee on Taxonomy of Viruses (ICTV).
- ^ a b c "Viral Zone". ExPASy. Retrieved 15 June 2015.
- ^ PMID 21084497.
- ^ "HCV Classification". International Committee on Taxonomy of Viruses (ICTV).[dead link]
- PMID 27692039.
- PMID 23572554.
- PMID 23818848.
- PMID 23740998.
- PMID 29495551.
- ^ Li LL, Liu MM, Shen S, Zhang YJ, Xu YL, Deng HY, Deng F, Duan ZJ (2019) Detection and characterization of a novel hepacivirus in long-tailed ground squirrels (Spermophilus undulatus) in China. Arch Virol
- PMID 25787289.
- PMID 25926652.
- PMID 26494702.
- S2CID 19064165.
- ^ Walter S, Rasche A, Moreira-Soto A, Pfaender S, Bletsa M, Corman VM, Aguilar-Setien A, García-Lacy F, Hans A, Todt D, Schuler G, Shnaiderman-Torban A, Steinman A, Roncoroni C, Veneziano V, Rusenova N12, Sandev N12, Rusenov A, Zapryanova D, García-Bocanegra I, Jores J, Carluccio A, Veronesi MC, Cavalleri JMV, Drosten C, Lemey P, Steinmann E, Drexler JF (2016) Differential infection patterns and recent evolutionary origins of Equine Hepaciviruses in donkeys. J Virol 91(1)
- ^ Goldberg TL, Sibley SD, Pinkerton ME, Dunn CD, Long LJ, White LC, Strom SM (2019) Multidecade mortality and a homolog of Hepatitis C Virus in bald eagles (Haliaeetus leucocephalus), the national bird of the USA. Sci Rep 9(1):14953
- ^ Chu L, Jin M, Feng C, Wang X, Zhang D (2019) A highly divergent hepacivirus-like flavivirus in domestic ducks. J Gen Virol
- PMID 26491167.
- ^ Williams SH, Levy A, Yates RA, Somaweera N, Neville PJ, Nicholson J, Lindsay MDA, Mackenzie JS, Jain K, Imrie A, Smith DW, Lipkin WI (2020) Discovery of Jogalong virus, a novel hepacivirus identified in a Culex annulirostris (Skuse) mosquito from the Kimberley region of Western Australia. PLoS One 15(1):e0227114