ORF8

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Betacoronavirus NS8 protein
disulfide bonds are shown in yellow and the intermolecular disulfide is shown in magenta. From PDB: 7JTL​.[1]
Identifiers
SymbolbCoV_NS8
PfamPF12093
InterProIPR022722
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

ORF8 is a

SARS epidemic, as well as in some bat coronaviruses.[4][3] For this reason the full-length gene and its protein are sometimes called ORF8ab.[3][6] The full-length gene, exemplified in SARS-CoV-2, encodes a protein with an immunoglobulin domain of unknown function, possibly involving interactions with the host immune system.[4][3][1] It is similar in structure to the ORF7a protein, suggesting it may have originated through gene duplication.[7][8]

Structure

ORF8 in SARS-CoV-2 encodes a protein of 121

transmembrane helix and is therefore not a transmembrane protein,[1][4] though it has been suggested it might have a membrane-anchored form.[3]

ORF8 in SARS-CoV and SARS-CoV-2 are very divergent, with less than 20%

Post-translational modifications

The full-length SARS-CoV ORF8ab protein is

N-glycosylation,[6] which is predicted to be conserved in the SARS-CoV-2 protein.[1] Under experimental conditions, both 8b and 8ab are ubiquitinated.[6]

Expression and localization

Along with the genes for other accessory proteins, the ORF8 gene is located near those encoding the structural proteins, at the

There are variable reports in the literature regarding the localization of SARS-CoV ORF8a, ORF8b, or ORF8ab proteins.[6] It is unclear if ORF8b is expressed at significant levels under natural conditions.[10][12] The full-length ORF8ab appears to localize to the ER.[12]

Function

The function of the ORF8 protein is unknown. It is not essential for viral replication in either SARS-CoV[6] or SARS-CoV-2,[4] though there is conflicting evidence on whether loss of ORF8 affects the efficiency of viral replication.[13]

A function often suggested for ORF8 protein is interacting with the host

antibodies to the protein have been found in patients with or recovered from COVID-19.[4][14] A study indicates that ORF8 is a transcription inhibitor.[15][16]

It has been suggested that the SARS-CoV ORF8a protein assembles into multimers and forms a viroporin.[17]

Evolution

Structural superposition of the Ig domains of ORF8 (blue, PDB: 7JTL[1]) and ORF7a (orange, PDB: 7CI3[18]) illustrating the similarity of their beta-sandwich topologies.

The

genomic instability.[3][19]

In SARS-CoV, the ORF8 region is thought to have originated through

ORF8 encodes a protein whose

MERS-CoV.[8] The beta and alpha Ig domains may be independent acquisitions, where ORF8 and ORF7a may have been acquired from host proteins.[2] It is also possible that the absence of ORF8 reflects gene loss in those lineages.[8]

References

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