PLUMED

Source: Wikipedia, the free encyclopedia.
PLUMED
Developer(s)Max Bonomi, Giovanni Bussi, Carlo Camilloni, Gareth Tribello
Initial release2009; 15 years ago (2009)
Stable release
2.7.1 / April 16, 2021; 2 years ago (2021-04-16)
Repositorygithub.com/plumed/plumed2
Written inC++ (bindings also available for C, Fortran, and Python)
Operating systemLinux, macOS
TypeMolecular dynamics
LicenseGNU LGPL
Websitewww.plumed.org

PLUMED is an open-source library implementing enhanced-sampling algorithms, various

free-energy methods, and analysis tools for molecular dynamics simulations. It is designed to be used together with ACEMD, AMBER, DL_POLY, GROMACS, LAMMPS, NAMD, OpenMM, ABIN, CP2K, i-PI, PINY-MD, and Quantum ESPRESSO, but it can also be used together with analysis and visualization tools VMD, HTMD, and OpenPathSampling.[1][2]

In addition, PLUMED can be used as a standalone tool for analysis of molecular dynamics trajectories. A graphical user interface named METAGUI is available.[3]

Collective variables

PLUMED offers a large collection of collective variables that serve as descriptions of complex processes that occur during molecular dynamics simulations, for example angles, positions, distances, interaction energies, and total energy.[4]

References

  1. S2CID 4852774
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  4. ^ "PLUMED: Introduction". www.plumed.org. Retrieved 2019-05-23.

External links


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