Rhodopsin

Source: Wikipedia, the free encyclopedia.

RHO
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Ensembl
UniProt
RefSeq (mRNA)

NM_000539

NM_145383

RefSeq (protein)

NP_000530

NP_663358

Location (UCSC)Chr 3: 129.53 – 129.54 MbChr 6: 115.91 – 115.92 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Rhodopsin, also known as visual purple, is a

receptor protein that triggers visual phototransduction in rods. Rhodopsin mediates dim light vision and thus is extremely sensitive to light.[6] When rhodopsin is exposed to light, it immediately photobleaches. In humans, it is regenerated fully in about 30 minutes, after which the rods are more sensitive.[7] Defects in the rhodopsin gene cause eye diseases such as retinitis pigmentosa and congenital stationary night blindness
.

Names

Rhodopsin was discovered by

When

cone opsin, they called apo-iodopsin photopsin (for its relation to photopic vision) and apo-rhodopsin scotopsin (for its use in scotopic vision).[18]

General

Rhodopsin is a protein found in the outer segment discs of rod cells. It mediates scotopic vision, which is monochromatic vision in dim light.[7][19] Rhodopsin most strongly absorbs green-blue light (~500 nm)[20][21] and appears therefore reddish-purple, hence the archaic term "visual purple".

Several closely related opsins differ only in a few amino acids and in the wavelengths of light that they absorb most strongly. Humans have, including rhodopsin, nine opsins,[15] as well as cryptochrome (light-sensitive, but not an opsin).[22]

Structure

Cattle rhodopsin

Rhodopsin, like other opsins, is a

phototransduction cascade.[41] Thus, a chemoreceptor is converted to a light or photo(n)receptor.[16]

The retinal binding lysine is conserved in almost all opsins, only a few opsins having lost it during

wild-type rhodopsin is constitutively active, if no 11-cis-retinal is bound, but much less.[48] Therefore 11-cis-retinal is an inverse agonist. Such mutations are one cause of autosomal dominant retinitis pigmentosa.[47] Artificially, the retinal binding lysine can be shifted to other positions, even into other transmembrane domains, without changing the activity.[49]

The rhodopsin of cattle has 348 amino acids, the retinal binding lysine being Lys296. It was the first opsin whose amino acid sequence[50] and 3D-structure were determined.[32] Its structure has been studied in detail by x-ray crystallography on rhodopsin crystals.[51] Several models (e.g., the bicycle-pedal mechanism, hula-twist mechanism) attempt to explain how the retinal group can change its conformation without clashing with the enveloping rhodopsin protein pocket.[52][53][54] Recent data support that rhodopsin is a functional monomer, instead of a dimer, which was the paradigm of G-protein-coupled receptors for many years.[55]

Within its native membrane, rhodopsin is found at a high density facilitating its ability to capture photons. Due to its dense packing within the membrane, there is a higher chance of rhodopsin capturing proteins. However, the high density also provides a disadvantage when it comes to G protein signaling because the diffusion becomes more difficult in a crowded membrane that is packed with the receptor, rhodopsin.[56]

Phototransduction

The visual cycle follows the renewal of the retinal chromophore. It runs in parallel to the phototransduction pathway.

Rhodopsin is an essential G-protein coupled receptor in

phototransduction
.

Activation

In rhodopsin, the aldehyde group of retinal is covalently linked to the amino group of a lysine residue on the protein in a protonated

cryogenic temperatures, and was initially referred to as prelumirhodopsin.[58] In subsequent intermediates lumirhodopsin and metarhodopsin I, the Schiff's base linkage to all-trans retinal remains protonated, and the protein retains its reddish color. The critical change that initiates the neuronal excitation involves the conversion of metarhodopsin I to metarhodopsin II, which is associated with deprotonation of the Schiff's base and change in color from red to yellow.[59]

Phototransduction cascade

The product of light activation, Metarhodopsin II, initiates the

cation channels. This leads to the hyperpolarization of photoreceptor cells, changing the rate at which they release transmitters.[60][41]

Deactivation

Meta II (metarhodopsin II) is deactivated rapidly after activating transducin by rhodopsin kinase and arrestin.[61] Rhodopsin pigment must be regenerated for further phototransduction to occur. This means replacing all-trans-retinal with 11-cis-retinal and the decay of Meta II is crucial in this process. During the decay of Meta II, the Schiff base link that normally holds all-trans-retinal and the apoprotein opsin (aporhodopsin) is hydrolyzed and becomes Meta III. In the rod outer segment, Meta III decays into separate all-trans-retinal and opsin.[61] A second product of Meta II decay is an all-trans-retinal opsin complex in which the all-trans-retinal has been translocated to second binding sites. Whether the Meta II decay runs into Meta III or the all-trans-retinal opsin complex seems to depend on the pH of the reaction. Higher pH tends to drive the decay reaction towards Meta III.[61]

Diseases of the retina

Mutations in the rhodopsin gene contribute majorly to various diseases of the retina such as

X-linked congenital stationary night blindness, mainly due to constitutive activation, when the mutations occur around the chromophore binding pocket of rhodopsin.[63] Several other pathological states relating to rhodopsin have been discovered including poor post-Golgi trafficking, dysregulative activation, rod outer segment instability and arrestin binding.[63]

See also

Explanatory notes

  1. ^ Hofmann and Lamb[17] use the term opsin in general to mean the group of opsins, however they call apo-rhodopsin in their figure 4 opsin, too.

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000163914Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000030324Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "RHO rhodopsin [Homo sapiens (human)]". NCBI. Retrieved 16 November 2017.
  6. .
  7. ^ .
  8. .
  9. . Retrieved 23 September 2015.
  10. ^ Boll F (1877). "Zur Anatomie und Physiologie der Retina" [On the anatomy and physiology of the retina]. Archiv für Anatomie und Physiologie, Physiologische Abtheilung (in German): 4–35.
  11. ^ "Rhodopsin: History and Etymology for rhodopsin". Merriam-Webster on-line dictionary.
  12. ^ See:
    • Merriam-Webster Online Dictionary: Rhodopsin: History and Etymology for rhodopsin
    • Ewald A, Kühne W (1878). "Untersuchungen über den Sehpurpur" [Investigations into rhodopsin]. Untersuchungen aus dem Physiologischen Institute der Universität Heidelberg (in German). 1: 139–218. From p. 181: "Was den Sehpurpur im Dunkel ändert, pflegt es z. Th. [= zum Theil] in derselben Weise zu thun, wie das Licht, d.h. erst eine gelbe Materie, dann farblose Substanz hervorzubringen. Der Kürze wegen und um dem Auslande unsere Bezeichnungen zugänglich zu machen, kann man sagen, Rhodopsin werde erst in Xanthopsin, dieses in Leukopsin zersetzt." (That which alters visual purple in the dark usually acts to some extent in the same way as light, that is, first producing a yellow material, then a colorless substance. For the sake of brevity, and in order to make our designations more accessible to foreigners, we can say that rhodopsin is first degraded into xanthopsin [- visual yellow], and [then] this is degraded into leucopsin [- visual white].)
  13. S2CID 19145558
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    PMID 35954284. Material was copied and adapted from this source, which is available under a Creative Commons Attribution 4.0 International License
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  19. ^ Rogers K. "Rhodopsin". Encyclopædia Britannica. Britannica.com. Retrieved 30 January 2016.
  20. S2CID 45459123
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  57. ^ The Nobel Foundation. "The Nobel Prize in Physiology or Medicine 1967". Nobelprize.org. Nobel Media AB 2014. Retrieved 12 December 2015.
  58. S2CID 4263392
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Further reading

External links