XCL1

Source: Wikipedia, the free encyclopedia.
XCL1
Available structures
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Ensembl
UniProt
RefSeq (mRNA)

NM_002995

NM_008510

RefSeq (protein)

NP_002986

NP_032536

Location (UCSC)Chr 1: 168.58 – 168.58 MbChr 1: 164.76 – 164.76 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Chemokine (C motif) ligand (XCL1) is a small cytokine belonging to the C chemokine family that is also known as lymphotactin. Chemokines are known for their function in inflammatory and immunological responses. This family C chemokines differs in structure and function from most chemokines.[5][6] There are only two chemokines in this family and what separated them from other chemokines is that they only have two cysteines; one N-terminal cysteine and one cysteine downstream. These both are called Lymphotactin, alpha and beta form, and claim special characteristics only found between the two. Lymphotactins can go through a reversible conformational change which changes its binding shifts.[7]

In normal tissues, XCL1 is found in high levels in

NK cells also secrete XCL1 along with other chemokines early in infections.[12] XCR1 expressing dendritic cells (DC) are a major target of XCL1.[12]

In humans, XCL1 is closely related to another chemokine called

XCL1 is found in two

metamorphic states: a monomer at 10°C, Ltn10, and a dimer at 40°C, Ltn40.[14]

Genomics

XCL1's gene is found on the long arm of chromosome 1, located on cytogenetic band q24.2 as seen in the infobox. The encoding gene is made of 6,017 DNA bases to encode for the protein XCL1.[15] This gene contains three exons and two introns as well as several transcription initiation sites.[8] This gene encodes for the 114-amino acid protein called XCL1 which is similar to other chemokines except that it lacks the first and third cysteine characteristics. This means that XCL1 only contains one cysteine creating a disulfide bond instead of two or three like the other chemokines.[5]

The genetic differences between XCL1 and

ribosomal subunit called L7a. In XCL2 have of the region encoding for L7a is cut off.[8] The only other genetic difference between the two mature proteins is the different amino acid in positions 7 and 8.[8][12] This amino acid difference may account for some biological differences. Some difficulties with comparing these two chemokines is that XCL2 has never been observed in a mouse.[12]

Structure

One thing that sets XCL1 apart from other

Biological significance

The pair of XCL1 and XCR1 are known to be involved in cross-presentation, antigen uptake, and induction of innate as well as adaptive cytotoxic immunity.[12] XCR1, the receptor for XCL1, is exclusively expressed in conventional dendritic cells.[12] XCL1 is secreted by NK cells and by antigen-specific CD8+ T-cells, along with other chemokines including IFN-gamma.[12] This process likely facilitates the cross-presentation of antigens by the dendritic cells.

XCL1 is also known to increate T cells in joints that are effected with rheumatoid arthritis.[6] They are also expressed on RA synovial lymphocytes.[6]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000143184Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026573Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^
    PMID 23663982
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  15. ^ "XCL1 Gene(Protein Coding)". GeneCards human gene database.
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