JASPAR
 | |
| Content | |
|---|---|
| Description | an open-access database of transcription factor binding profiles |
| Data types captured | Eukaryotic transcription factors, their binding sites and binding profiles |
| Organisms | eukaryotes |
| Contact | |
| Authors | Sandelin, A |
| Primary citation | Sandelin, A. et al. (2004) [1] |
| Release date | 2004 |
| Access | |
| Website | http://jaspar.genereg.net/ |
JASPAR is an
taxonomic groups. From the supplied PFMs, users may generate position-specific weight matrices (PWM). The JASPAR database was introduced in 2004. There were seven major updates and new releases in 2006, 2008, 2010, 2014, 2016, 2018, 2020 and 2022, which is the latest release of JASPAR.[3][4][5][6][7][8][9]
[10]
Availability
The JASPAR database is an open-source and freely available for scientific community at http://jaspar.genereg.net/.
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- RegTransBase - transcription factor binding sites in a diverse set of bacteria.
- RegulonDB – Primary database on transcriptional regulation in Escherichia coli
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- MethMotif An integrative database of cell-specific transcription factor binding site motifs coupled with DNA methylation profiles.
References
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