Thermococcus litoralis

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Thermococcus litoralis
Scientific classification
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Species:
T. litoralis
Binomial name
Thermococcus litoralis[1]
Neuner et al. 2001

Thermococcus litoralis (T. litoralis) is a species of

hydrothermal vents as well as shallow submarine thermal springs and oil wells.[2][3][4] It is an anaerobic organotroph hyperthermophile that is between 0.5–3.0 μm (20–118 μin) in diameter.[2] Like the other species in the order thermococcales, T. litoralis is an irregular hyperthermophile coccus that grows between 55–100 °C (131–212 °F).[2] Unlike many other thermococci, T. litoralis is non-motile. Its cell wall consists only of a single S-layer that does not form hexagonal lattices.[2] Additionally, while many thermococcales obligately use sulfur as an electron acceptor in metabolism, T. litoralis only needs sulfur to help stimulate growth, and can live without it.[3] T. litoralis has recently been popularized by the scientific community for its ability to produce an alternative DNA polymerase to the commonly used Taq polymerase. The T. litoralis polymerase, dubbed the vent polymerase, has been shown to have a lower error rate than Taq but due to its proofreading 3’–5’ exonuclease abilities.[5]

DNA polymerase

DNA polymerase
Identifiers
OrganismThermococcus litoralis
Symbolpol
UniProt
P30317
Search for
StructuresSwiss-model
DomainsInterPro

The DNA polymerase of Thermococcus litoralis is stable at high temperatures, with a half-life of eight hours at 95 °C (203 °F) and two hours at 100 °C (212 °F).[6] It also has a proofreading activity that is able to reduce mutation frequencies to a level 2–4 times lower than most non-proofreading DNA polymerases.[7]

Habitat and ecology

T. litoralis grows near shallow and deep sea hydrothermal vents in extremely hot water. The optimal growth temperature for T. litoralis is 85–88 °C.

sulfites, and phosphorus.[3]

Physiology

T. litoralis can utilize

PFK instead of an ATP dependent versions of the enzymes.[4]

Novel strains

New DNA analysis has shown several isolates of T. litoralis, MW and Z-1614, which are most likely new strains. MW and Z-1614 were confirmed to be strains of T. litoralis through

DNA-DNA hybridization, C–G ratios (38–41 mol%), and immunoblotting analyses. They slightly differ in morphology from the previously isolated T. litoralis in that they all have flagella.[2] Through the same processes it has been shown that the previously discovered Caldococcus litoralis was actually T. litoralis.[2]
The genome for T. litoralis has yet to be fully sequenced.

References

Further reading

External links