Paraplegin

Source: Wikipedia, the free encyclopedia.
SPG7
Available structures
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Ensembl
UniProt
RefSeq (mRNA)

NM_003119
NM_199367
NM_001363850

NM_153176
NM_001364435

RefSeq (protein)

NP_003110
NP_955399
NP_001350779

NP_694816
NP_001351364

Location (UCSC)Chr 16: 89.49 – 89.56 MbChr 8: 123.79 – 123.82 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Paraplegin is a protein that in humans is encoded by the SPG7 gene located on chromosome 16.[5][6][7]

Structure

The SPG7 gene contains 21 exons and encodes for a protein that is approximately 88 kDa in size. Two transcript variants encoding distinct isoforms have been identified for this gene.

The structure of the SPG7 resolved by X-ray crystallography reveals that the protein functions as a hexamer and is structurally most similar to bacterial FtSH proteases. It contains an FtsH-homology protease domain as well as an AAA+ homology ATPase domain. The protein is thought to use ATPase-driven conformational changes to the AAA-domain in order to deliver the substrate peptides to be degraded to its protease core.[8]

Function

The SPG7 protein is a nuclear-encoded

mitochondrial proteases that function in mitochondrial protein quality control
.

Interactions

SPG7 interacts with AFG like AAA ATPase 2 (AFG3L2) on the mitochondrial inner membrane to form the m-AAA metalloproteinase complex.

Clinical significance

Mutations associated with this gene cause autosomal recessive

neurodegenerative disorder that is characterized by a slow, gradual, progressive weakness and spasticity of the lower limbs. SPG7 mutations have also been associated with other undiagnosed ataxia.[9][10][11]

In model animals, knockdown of spastic paraplegia 7 by siRNA inhibits the early stages of HIV-1 replication in 293T cells infected with VSV-G pseudotyped HIV-1.[12] It has been shown that an SPG7 variant escapes phosphorylation-regulated processing by AFG3L2 and increases mitochondrial reactive oxygen species generation and is correlated with many clinical phenotypes.[13] Furthermore, SPG7 deficiency is associated with abnormal mitochondrial DNA maintenance, which may lead to secondary mitochondrial DNA lesions and impaired respiratory activities and mitochondrial functions.[14]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000197912Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000000738Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. PMID 9635427
    .
  6. .
  7. ^ "Entrez Gene: SPG7 spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)".
  8. PMID 19841671
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Further reading

External links