ABCA12
| ABCA12 | |||
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Gene ontology | |||
| Molecular function | |||
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| Sources:Amigo / QuickGO | |||
Ensembl | |||||||||
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| RefSeq (protein) | |||||||||
| Location (UCSC) | Chr 2: 214.93 – 215.14 Mb | Chr 1: 71.28 – 71.45 Mb | |||||||
| PubMed search | [3] | [4] | |||||||
| View/Edit Human | View/Edit Mouse |
ATP-binding cassette sub-family A member 12 also known as ATP-binding cassette transporter 12 is a protein that in humans is encoded by the ABCA12 gene.[5]
ABCA12 belongs to a group of genes called the
The ABCA12 gene is located on the long (q) arm of
Clinical significance
Harlequin-type ichthyosis
Several mutations in the ABCA12 gene are known to cause harlequin-type ichthyosis.[7] Most of these mutations are predicted to lead to an absence of ABCA12 protein or the production of an extremely small version of the protein that cannot transport lipids properly. A loss of functional ABCA12 protein causes numerous problems with the development of the epidermis before and after birth. Abnormalities in lipid transport prevent the skin from forming an effective barrier and result in the hard, thick scales characteristic of harlequin ichthyosis.
Lamellar ichthyosis type 2
Mutations in the ABCA12 gene also cause another severe skin disorder, lamellar ichthyosis type 2.[8][9] People with this disorder have red, scaly, plate-like skin covering most of their bodies. The ABCA12 mutations that cause this disorder substitute one amino acid (a building block of proteins) for another amino acid in the ABCA12 protein. These mutations almost always occur in an important functional region of the protein (the region that binds to ATP, a molecule that supplies energy for chemical reactions). Changes in the structure of the ABCA12 protein likely disrupt its ability to transport lipids, which affects the development of skin before and after birth.
References
- ^ a b c GRCh38: Ensembl release 89: ENSG00000144452 – Ensembl, May 2017
- ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000050296 – Ensembl, May 2017
- ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
- ^ "Entrez Gene: ATP-binding cassette".
- PMID 23770033.
- PMID 15756637.
- S2CID 28012695.
- PMID 12915478.
Further reading
- Lefévre C, Audebert S, Jobard F, Bouadjar B, Lakhdar H, Boughdene-Stambouli O, Blanchet-Bardon C, Heilig R, Foglio M, Weissenbach J, Lathrop M, Prud'homme JF, Fischer J (September 2003). "Mutations in the transporter ABCA12 are associated with lamellar ichthyosis type 2". Hum. Mol. Genet. 12 (18): 2369–78. S2CID 23836833.
- Thomas AC, Tattersall D, Norgett EE, et al. (2009). "Premature terminal differentiation and a reduction in specific proteases associated with loss of ABCA12 in Harlequin ichthyosis". Am. J. Pathol. 174 (3): 970–8. PMID 19179616.
- Yamanaka Y, Akiyama M, Sugiyama-Nakagiri Y, et al. (2007). "Expression of the keratinocyte lipid transporter ABCA12 in developing and reconstituted human epidermis". Am. J. Pathol. 171 (1): 43–52. PMID 17591952.
- Thomas AC, Sinclair C, Mahmud N, et al. (2008). "Novel and recurring ABCA12 mutations associated with harlequin ichthyosis: implications for prenatal diagnosis". Br. J. Dermatol. 158 (3): 611–3. S2CID 10098614.
- Rose JE, Behm FM, Drgon T, et al. (2010). "Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score". Mol. Med. 16 (7–8): 247–53. PMID 20379614.
- Dean M, Rzhetsky A, Allikmets R (2001). "The human ATP-binding cassette (ABC) transporter superfamily". Genome Res. 11 (7): 1156–66. S2CID 9528197.
- Jiang YJ, Lu B, Kim P, et al. (2008). "PPAR and LXR activators regulate ABCA12 expression in human keratinocytes". J. Invest. Dermatol. 128 (1): 104–9. PMID 17611579.
- Ohkubo T, Shibata N, Ohnuma T, et al. (2005). "No genetic association between ATP binding cassette proteins and Japanese sporadic Alzheimer's disease". Dement Geriatr Cogn Disord. 20 (2–3): 95–8. S2CID 25370003.
- Jiang YJ, Uchida Y, Lu B, et al. (2009). "Ceramide stimulates ABCA12 expression via peroxisome proliferator-activated receptor {delta} in human keratinocytes". J. Biol. Chem. 284 (28): 18942–52. PMID 19429679.
- Annilo T, Shulenin S, Chen ZQ, et al. (2002). "Identification and characterization of a novel ABCA subfamily member, ABCA12, located in the lamellar ichthyosis region on 2q34". Cytogenet. Genome Res. 98 (2–3): 169–76. S2CID 28012695.
- Akiyama M, Sugiyama-Nakagiri Y, Sakai K, et al. (2005). "Mutations in lipid transporter ABCA12 in harlequin ichthyosis and functional recovery by corrective gene transfer". J. Clin. Invest. 115 (7): 1777–84. PMID 16007253.
- Parmentier L, Clepet C, Boughdene-Stambouli O, et al. (1999). "Lamellar ichthyosis: further narrowing, physical and expression mapping of the chromosome 2 candidate locus". Eur. J. Hum. Genet. 7 (1): 77–87. S2CID 17929356.
- Kelsell DP, Norgett EE, Unsworth H, et al. (2005). "Mutations in ABCA12 underlie the severe congenital skin disease harlequin ichthyosis". Am. J. Hum. Genet. 76 (5): 794–803. PMID 15756637.
- Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. S2CID 21903526.
- Mammalian Gene Collection Program Team; Strausberg, R. L.; Feingold, E. A.; Grouse, L. H.; et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". PMID 12477932.
- Natsuga K, Akiyama M, Kato N, et al. (2007). "Novel ABCA12 mutations identified in two cases of non-bullous congenital ichthyosiform erythroderma associated with multiple skin malignant neoplasia". J. Invest. Dermatol. 127 (11): 2669–73. PMID 17508018.
- Sakai K, Akiyama M, Yanagi T, et al. (2009). "ABCA12 is a major causative gene for non-bullous congenital ichthyosiform erythroderma". J. Invest. Dermatol. 129 (9): 2306–9. PMID 19262603.
- Allikmets R, Gerrard B, Hutchinson A, Dean M (1996). "Characterization of the human ABC superfamily: isolation and mapping of 21 new genes using the expressed sequence tags database". Hum. Mol. Genet. 5 (10): 1649–55. PMID 8894702.
- Thomas AC, Cullup T, Norgett EE, et al. (2006). "ABCA12 is the major harlequin ichthyosis gene". J. Invest. Dermatol. 126 (11): 2408–13. PMID 16902423.
External links
- GeneCard
- ABCA12+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
- ABCA12 human gene location in the UCSC Genome Browser.
- ABCA12 human gene details in the UCSC Genome Browser.