HIPK2

Source: Wikipedia, the free encyclopedia.
HIPK2
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Ensembl
UniProt
RefSeq (mRNA)

NM_001113239
NM_022740

NM_001136065
NM_001294143
NM_001294144
NM_010433

RefSeq (protein)

NP_001106710
NP_073577

NP_001129537
NP_001281072
NP_001281073
NP_034563

Location (UCSC)Chr 7: 139.56 – 139.78 MbChr 6: 38.67 – 38.85 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Homeodomain-interacting protein kinase 2 is an enzyme that in humans is encoded by the HIPK2 gene.[5] HIPK2 can be categorized as a Serine/Threonine Protein kinase, specifically one that interacts with homeodomain transcription factors.[6] It belongs to a family of protein kinases known as the DYRK kinases.[7] Within this family HIPK2 belongs to a group of homeodomain-interacting protein kinases (HIPKs), including HIPK1 and HIPK3.[8] HIPK2 can be found in a wide variety of species and its functions in gene expression and apoptosis are regulated by several different mechanisms.

Discovery

HIPK2 was discovered concurrently with HIPKs 1 and 3 in 1998. The HIPKs were discovered during an experiment that tried to identify genes that when expressed, yielded products that interacted with transcription factors related to the NK

Chromosome 7 (human) in the human genome.[7] In mice, HIPK2 was discovered to be on Chromosome 6.[7]

Homology

There is evidence to suggest that HIPKs including HIPK2 are evolutionarily conserved proteins across a wide array of species. The human sequence shares a close similarity to a sequence from the genome of Caenorhabditis elegans.[8] HIPKs also share a close similarity with YAK1 in yeast and are in the same family as a kinase from Dictyostelium.[7][8] Furthermore, HIPKs are able to interact with homeoproteins from other species, such as NK-1 and NK-3 in Drosophila as well as Nkx-2.5 in mice.[8] HIPK2 can also be found in dogs,[9] cats,[10] sheep,[11] and zebrafish[12] as well as many other species.

Localization

Expression in tissues

HIPK2 is expressed in nearly all tissue types, however it is highly expressed in the heart, muscle and kidneys.

Human embryo, specifically in the retina, muscles, and neural tissues.[14]

Sub-cellular localization

HIPK2 is found in the nucleus within structures called nuclear speckles.[7][15] It is also associated with PML bodies, which are also structures found in the nucleus.[16] Despite being found predominately in the nucleus, HIPK2 can also be Cytoplasmic.[17]

Structure

Gene

The HIPK2 gene contains 13

Kilo-base pair sequence.[18][19] Along with the other HIPKs, it contains three conserved sequences: a protein kinase domain, an interaction domain, a PEST sequence, and a YH domain.[8] Alternative splicing produces three different messenger RNAs, which subsequently lead to the production of three Protein isoforms.[20]

Protein

The HIPK2 protein is 1198

p53.[26] While there are signals targeting HIPK2 to nuclear speckles, there is also a speckle retention sequence that causes HIPK2 to remain in the nuclear speckles.[17] The auto-inhibitory domain, which contains an ubiquitylation site at the K1182 residue is located at the C-terminus.[24]

Function

HIPK2 has two major functions. It acts as a co-repressor for NK homeodomain transcription factors, increasing their

Regulation

HIPK2 is regulated by other proteins, as well as cellular conditions and post-translational modifications.[31][30][32][33]

Positive

Under conditions of DNA damage, HIPK2 is stabilized and subject to positive regulation. The activity of HIPK2 is increased through the action of

p300 again stabilizes HIPK2 but, increases its ability to induce apoptosis.[32] Phosphorylation of HIPK2 at residues T880 and S882, via another kinase or through auto-phosphorylation, leads to the recruitment of PIN1 and stabilization of HIPK2.[33] This results in increased apoptotic function of HIPK2.[33]

Negative

Under regular conditions HIPK2 is unstable and is subject to negative regulation. HIPK2 is subject to regulation by the ubiquitin proteasome pathway, in which ubiquitin ligases bind to HIPK2, leading to polyubiquitination at the K1182 residue, localization to the proteasome and subsequent degradation of the protein. leads to protein degradation.[17][31] The PEST sequence found in HIPK2 is also linked to protein degradation.[34] HIPK2 activity can also be down regulated by the protein HMGA1, which transports it back to the cytoplasm.[17] In conditions of oxidative stress sumoylation of HIPK2 is discouraged and acetylation is promoted, resulting in its stabilization and the inhibition of its ability to facilitate apoptosis.[30]

p53

p53 regulates HIPK2 using both positive and negative mechanisms.[17] p53 binds to the third intron of the caspase 6 gene, and promotes the activation of the gene.[35] Caspase 6 in turn activates HIPK2. Conversely, p53 down regulates HIPK2 by activating the ubiquitin ligase mdm2. An interaction of mdm2 and HIPK2 leads to the ubiquitination and eventual degradation of HIPK2.[17]

Mutations

Two mutations have been discovered in the speckle retention sequence, both of which are missense.[36] One of which was named R868W, meaning that at residue 868 where the wild type amino acid sequence would have contained an arginine residue, it now contains a tryptophan residue. The other mutation was named N958I, meaning that at residue 958 where the wild type amino acid sequence would have contained an asparagine residue, it now contains an isoleucine residue. The R868W mutation is the result of cytosine to thymine point mutation and the N985I mutation resulted from an adenine to thymine point mutation.[36] The R868W mutation was found in exon 12 and the N985I mutation was found in exon 13.[36] These mutations lead to forms of HIPK2 that are less active and show abhorrent localization to nuclear speckles.[36] The speckle retention sequence is necessary for HIPK2 function in transcription activation as deletion of this sequence inhibits the function.[36]

Interactions

HIPK2 interacts with several other proteins:

Clinical significance

Improper HIPK2 function has been implicated in the pathology of diseases such as acute myeloid leukemia,[36] myelodysplastic syndrome[36] through mutations in the speckle retention sequence and Alzheimer's disease through hyperdegradation of HIPK2.[40] Consistent with its tissue expression patterns, loss of HIPK2 function has also been implicated in kidney fibrosis[41] and cardiovascular disease.[42]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000064393Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000061436Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. PMID 11267674
    .
  6. .
  7. ^ .
  8. ^ .
  9. ^ "HIPK2 homeodomain interacting protein kinase 2 [Canis lupus familiaris (dog)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2017-11-29.
  10. ^ "HIPK2 homeodomain interacting protein kinase 2 [Felis catus (domestic cat)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2017-11-29.
  11. ^ "HIPK2 homeodomain interacting protein kinase 2 [Ovis aries (sheep)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2017-11-29.
  12. ^ "hipk2 homeodomain interacting protein kinase 2 [Danio rerio (zebrafish)] - Gene - NCBI". www.ncbi.nlm.nih.gov. Retrieved 2017-11-29.
  13. ^
    PMID 11798164
    .
  14. ^ . The nucleotide sequence data have been deposited in GenBank under the accession numbers AF208291 and AF208292, respectively
  15. .
  16. .
  17. ^ .
  18. ^ Thierry-Mieg, Danielle; Thierry-Mieg, Jean. "AceView: Gene:HIPK2, a comprehensive annotation of human, mouse and worm genes with mRNAs or ESTsAceView". www.ncbi.nlm.nih.gov. Retrieved 2017-11-28.
  19. PMID 15607427
    .
  20. ^ "HIPK2 - Homeodomain-interacting protein kinase 2 - Homo sapiens (Human) - HIPK2 gene & protein". www.uniprot.org. Retrieved 2017-11-28.
  21. ^ a b c "ExPASy - ProtParam". web.expasy.org. Retrieved 2017-11-28.
  22. PMID 20508833
    .
  23. ^ .
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  36. ^ .
  37. PMID 26247811. Archived from the original
    (PDF) on 2018-07-21. Retrieved 2019-07-08.
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Further reading

External links

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