User:TerrixMorgan/sandbox

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TerrixMorgan/sandbox
Scientific classification
Domain:
Bacteria
Kingdom:
Phylum:
Proteobacteria
Class:
Order:
Family:
Azotobacteraceae
Genus:
Species:
Azotobacter salinestris
Binomial name
Azotobacter salinestris

Azotobacter salinestris - salinestris, comes from the Latin words “salinus,” meaning saline, and “-estris”, which means “living in”.[1] It is a Gram-negative, nitrogen fixing bacteria.[1] It can be found living in soil or water habitats as single cells or in chains of 6 to 8 cells.[1] This organism is motile at younger stages but loses its flagella at older stages.[1] This bacteria is known for its potential use in bioremediation.[2]

Isolation

William J. Page and Shailaja Shivprasad isolated Azotobacter salinestris from

micrograms of copper chloride per milliliter of solution.[1] The medium was incubated at 30oC and stored at 4oC.[1] Colony formation was noted after 2-3 days of incubation.[1] The same soil samples were also used to inoculate slant cultures, which were stored at room temperature.[1] Azotobacter salinestris was found to lose viability in the slant cultures when stored at 4oC.[1] Through these cultures and characterization tests, A. salinestris was found to share many of the general characteristics specific to the species Azotobacter.[1] Originally, A. salinestris colonies were classified as Azotobacter chroococcum but were later identified as a separate species based on their salt dependent growth. [4]

Characteristics

Morphology

Azotobacter salinestris is a

Physiology

The bacteria that performed the most efficient atmospheric nitrogen fixation were from samples grown in 0.05% to 0.1% saline concentration soils.[1] It was also observed that nitrogen fixation rates were not affected by the presence of oxygen.[1] A. salinestris that grows in soils is a facultative anaerobe. [1] Colonies growing in aquatic habitats were determined to be microaerophilic and very sensitive to the presence of hydrogen peroxide since they do not produce a catalase enzyme.[1]

Metabolism

Azotobacter salinestris can use

sodium ions as their electron acceptor, but will also use rubidium.[1] Strains that do not have access to sodium ions produce acid a a product of the metabolism of their growth-promoting carbon substrate.[1]

Ecology

All known Azotobacter salinestris samples were isolated from soils that had a

 

Azotobacter chroococcum is the most common species from Azotobacter to be isolated from soil samples.[1] It is also a close relative to Azotobacter salinestris.[1] All growth conditions used to isolate and determine optimum living conditions for Azotobacter salinestris were based on the optimal living conditions for Azotobacter chroococcum.[1] The defining factor between these two species was the dependence on sodium ions to live. A. salinestris displayed a stronger dependence on sodium to live than A. chroococcum.[1]

Genetics

While Page and Shivprasad are credited with the discovery and characterization of A. salinestris, Eydne and Wachter are credited with the sequencing of the bacteria’s 5S rRNA in 1987.[1]

Although the results were never published,

16S rRNA sequence, conducted by Moore and the University of Houston, confirmed that A. salinestris was indeed a separate species of the genus Azotobacter.[1]

Importance

Azotobacter salinestris was the first

efflux.[3] It can tolerate up to 5% glyphosate, which is a pesticide used to kill weeds that compete with crops.[5] Because the species is a common nitrogen fixer, it is important to the agricultural industry for the species to be able to survive in the presence of such a common pesticide. [5] It can degrade endosulfan, which is an insecticide that is highly hazardous to human, mammal, and fish health. [2] Endosulfan use was banned in 2012 by the United States, following a precedent established by New Zealand and the European Union. [6] The decision to ban endosulfan use came after a study that showed the health risks to humans and wildlife were much higher than expected. [7][8] It is similar to DDT (dichlorodiphenyltrichloroethane), causes birth defects, and is an estrogen analog.[7] Therefore, the ability of A. salinestris to break down endosulfan is important for bioremediation to the environments where the substance was used.[2]

References

  1. ^ a b c d e f g h i j k l m n o p q r s t u v w x y z aa ab ac ad ae af ag ah ai aj Page, and Shivprasad. "ITIS Standard Report Page: Azotobacter Salinestris." ITIS Standard Report Page: Azotobacter Salinestris. N.p., 1991. Web. 8 Feb. 2016. <http://www.itis.gov/servlet/SingleRpt/SingleRpt?search_topic=TSN&search_value=959650>
  2. ^ a b c d Chennappa, Gurikar, et al. "Pesticide tolerant Azotobacter isolates from paddy growing areas of northern Karnataka, India." World Journal of Microbiology and Biotechnology 30.1 (2014): 1-7. <http://link.springer.com/article/10.1007%2Fs11274-013-1412-3>
  3. ^ a b Page, William J and Shailaja Shivprasad. "Examination of the role of Na+ in the physiology of the Na+-dependent soil bacterium Azotobacter salinestris." Microbiology 137.12 (1991): 2891-2899.<https://www.researchgate.net/publication/247608931_Examination_of_the_role_of_Na_in_the_physiology_of_the_Na-dependent_soil_bacterium_Azotobacter_salinestris>
  4. ^ a b Bergey, D. H., Brenner, D. J., Krieg, N. R., & Staley, J. T. (2005). Bergey's manual of systematic bacteriology. Volume 2. The proteobacteria. Part B. The gammaproteobacteria (Vol. 2). New York, NY: Springer.>
  5. ^ a b Castillo JM, Casas J, Romero E (2011) Isolation of an endosulfan degrading bacterium from a coffee farm soil: persistence and inhibitory effect on its biological functions. Sci Total Environ 412–413:20–27><http://www.sciencedirect.com/science/article/pii/S0048969711010965?np=y>
  6. ^ Martin, David S. EPA moves to ban DDT cousin. CNN. June 10, 2010. <http://thechart.blogs.cnn.com/2010/06/10/epa-moves-to-ban-ddt-cousin/>
  7. ^ a b Cone, M. (2010, June 10). Endosulfan to Be Banned, Pesticide Poses "Unacceptable Risks," EPA Says. Retrieved April 27, 2016, from http://www.scientificamerican.com/article/endosulfan-banned-epa/
  8. ^ Beauvais, S. L., Silva, M. H., & Powell, S. (2010). Human health risk assessment of endosulfan. Part III: Occupational handler exposure and risk. Regulatory Toxicology and Pharmacology, 56(1), 28-37. <http://www.ncbi.nlm.nih.gov/pubmed/19854234>