Adenomatous polyposis coli

Source: Wikipedia, the free encyclopedia.
APC
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Ensembl
UniProt
RefSeq (mRNA)

NM_001127511
NM_000038
NM_001127510

NM_007462
NM_001360979
NM_001360980

RefSeq (protein)

n/a

Location (UCSC)n/aChr 18: 34.22 – 34.32 Mb
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Adenomatous polyposis coli (APC) also known as deleted in polyposis 2.5 (DP2.5) is a

desmoid tumors.[5][6]

APC is classified as a

beta-catenin, is controlled by the APC protein (see: Wnt signaling pathway
). Regulation of beta-catenin prevents genes that stimulate cell division from being turned on too often and prevents cell overgrowth.

The human APC gene is located on the long (q) arm of

mammals
for which complete genome data are available.

Structure

The full-length human protein comprises 2,843 amino acids with a (predicted) molecular mass of 311646 Da. Several N-terminal domains have been structurally elucidated in unique atomistic high-resolution complex structures. Most of the protein is predicted to be intrinsically disordered. It is not known if this large predicted unstructured region from amino acid 800 to 2843 persists in vivo or would form stabilised complexes – possibly with yet unidentified interacting proteins.[9] Recently, it has been experimentally confirmed that the mutation cluster region around the center of APC is intrinsically disordered in vitro.[10]

Role in cancer

The most common mutation in colon cancer is inactivation of APC. In absence of APC inactivating mutations, colon cancers commonly carry activating mutations in

both alleles (copies of the APC gene) must be mutated. Mutations in APC or β-catenin must be followed by other mutations to become cancerous; however, in carriers of an APC-inactivating mutation, the risk of colorectal cancer by age 40 is almost 100%.[5]

desmoid tumors in FAP patients.[6]

Another mutation is carried by approximately 6 percent[

colon cancer,[13] with moderate effect size.[14] APC I1307K has also been implicated as a risk factor for certain other cancers.[14]

Regulation of proliferation

The (Adenomatous Polyposis Coli) APC protein normally builds a "destruction complex" with glycogen synthase kinase 3-alpha and or beta (

microtubules via the PDZ binding domain, stabilizing them.[19] The deactivation of the APC protein can take place after certain chain reactions in the cytoplasm are started, e.g. through the Wnt signals that destroy the conformation of the complex.[citation needed] In the nucleus it complexes with legless/BCL9, TCF, and Pygo.[citation needed
]

The ability of APC to bind β-catenin has been classically considered to be an integral part of the protein's mechanistic function in the destruction complex, along with binding to Axin through the SAMP repeats.[20] These models have been substantiated by observations that common APC loss of function mutations in the mutation cluster region often remove several β-catenin binding sites and SAMP repeats. However, recent evidence from Yamulla and colleagues have directly tested those models and imply that APC's core mechanistic functions may not require direct binding to β-catenin, but necessitate interactions with Axin.[21] The researchers hypothesized that APC's many β-catenin binding sites increase the protein's efficiency at destroying β-catenin, yet are not absolutely necessary for the protein's mechanistic function. Further research is clearly necessary to elucidate the precise mechanistic function of APC in the destruction complex.

Mutations

Familial adenomatous polyposis of the intestine

Mutations in APC often occur early on in cancers such as colon cancer.[9] Patients with familial adenomatous polyposis (FAP) have germline mutations, with 95% being nonsense/frameshift mutations leading to premature stop codons. 33% of mutations occur between amino acids 1061–1309. In somatic mutations, over 60% occur within a mutation cluster region (1286–1513), causing loss of axin-binding sites in all but one of the 20AA repeats. Mutations in APC lead to loss of β-catenin regulation, altered cell migration and chromosome instability.[11]

Neurological role

Rosenberg et al. found that APC directs cholinergic synapse assembly between neurons, a finding with implications for autonomic neuropathies, for Alzheimer's disease, for age-related hearing loss, and for some forms of epilepsy and schizophrenia.[22] (29)

Interactions

APC (gene) has been shown to

interact
with:

Overview of signal transduction pathways involved in apoptosis.

See also

References

  1. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000005871Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. PMID 1651563
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  8. ^ "OrthoMaM phylogenetic marker: APC coding sequence".[permanent dead link]
  9. ^
    PMID 21859464
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  12. ^ "Familial Adenomatous Polyposis". The Lecturio Medical Concept Library. Retrieved 22 July 2021.
  13. PMID 23576677
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Further reading

External links