S-Adenosylmethionine synthetase enzyme

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Methionine adenosyltransferase
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S-Adenosylmethionine synthetase (

non-polar amino acid) and ATP (the basic currency of energy).[1]

Function

AdoMet is a

methyl donor for transmethylation. It gives away its methyl group and is also the propylamino donor in polyamine biosynthesis. S-adenosylmethionine synthesis can be considered the rate-limiting step of the methionine cycle.[2]

As a

methyl donor SAM allows DNA methylation. Once DNA is methylated, it switches the genes off and therefore, S-adenosylmethionine can be considered to control gene expression.[3]

SAM is also involved in

gene transcription, cell proliferation, and production of secondary metabolites.[4] Hence SAM synthetase is fast becoming a drug target, in particular for the following diseases: depression, dementia, vacuolar myelopathy, liver injury, migraine, osteoarthritis, and as a potential cancer chemopreventive agent.[5]

This article discusses the protein domains that make up the SAM synthetase enzyme and how these domains contribute to its function. More specifically, this article explores the shared pseudo-3-fold symmetry that makes the domains well-adapted to their functions.[6]

This enzyme catalyses the following chemical reaction

ATP + L-methionine + H2O
S-adenosyl-L-methionine

Conserved motifs in the 3'UTR of MAT2A mRNA

A computational comparative analysis of vertebrate

S-adenosylhomocysteine or L-Methionine. They are proposed to be involved in transcript stability and their functionality is currently under investigation.[7]

Protein overview

The S-adenosylmethionine synthetase enzyme is found in almost every organism bar parasites which obtain AdoMet from their host.

Isoenzymes are found in bacteria, budding yeast and even in mammalian mitochondria. Most MATs are homo-oligomers and the majority are tetramers. The monomers are organised into three domains formed by nonconsecutive stretches of the sequence, and the subunits interact through a large flat hydrophobic surface to form the dimers.[8]

S-adenosylmethionine synthetase N terminal domain

S-adenosylmethionine synthetase N terminal domain
SCOP2
1mxa / SCOPe / SUPFAM
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

In

N-terminal
of the enzyme.

N terminal domain function

The N terminal domain is well conserved across different species. This may be due to its important function in

cation binding. The residues involved in methionine binding are found in the N-terminal domain.[8]

N terminal domain structure

The N terminal region contains two alpha helices and four beta strands.[6]

S-adenosylmethionine synthetase Central domain

S-adenosylmethionine synthetase Central domain
SCOP2
1mxa / SCOPe / SUPFAM
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

Central terminal domain function

The precise function of the central domain has not been fully elucidated, but it is thought to be important in aiding catalysis.

Central domain Structure

The central region contains two alpha helices and four beta strands.[6]

S-adenosylmethionine synthetase, C terminal domain

S-adenosylmethionine synthetase, C-terminal domain
SCOP2
1mxa / SCOPe / SUPFAM
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

In

C terminus
of the S-adenosylmethionine synthetase

C terminal domain function

The function of the C-terminal domain has been experimentally determined as being important for cytoplasmic localisation. The residues are scattered along the C-terminal domain sequence however once the protein folds, they position themselves closely together.[3]

C terminal domain Structure

The C-terminal domains contains two alpha-helices and four beta-strands.[6]

References

External links

This article incorporates text from the public domain Pfam and InterPro: IPR022630