Thermotogae
Thermotogae | |
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Scientific classification | |
Domain: | Bacteria |
Phylum: | Thermotogota Reysenbach 2021[1] |
Class: | Thermotogae Reysenbach 2002 |
Orders | |
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Synonyms | |
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The Thermotogota are a
Characteristics
The name of this phylum is derived from the existence of many of these organisms at high temperatures along with the characteristic sheath structure, or "toga", surrounding the cells of these species.
Molecular signatures
Until recently, no biochemical or
Additionally, a 51 aa insertion CSI was identified to be specific for all Thermotogales as well as
Phylogeny
16S rRNA based | 120 single copy marker proteins based GTDB 08-RS214[16][17][18] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Taxonomy
This phylum presently consists of a single class (Thermotogae), four orders (
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[33] and National Center for Biotechnology Information (NCBI)[34]
- Class Thermotogae Reysenbach 2002
- Genus ?Caldotoga Xue et al. 1999
- Order Kosmotogales Bhandari & Gupta 2014
- Family Kosmotogaceae Bhandari & Gupta 2014
- Genus Kosmotoga DiPippo et al. 2009 [Thermococcoides Feng et al. 2010]
- Genus Mesotoga Nesbo et al. 2013
- Family Kosmotogaceae Bhandari & Gupta 2014
- Order Mesoaciditogales Itoh et al. 2015
- Family Mesoaciditogaceae Itoh et al. 2015
- Genus Athalassotoga Itoh et al. 2015
- Genus Mesoaciditoga Reysenbach et al. 2013
- Family Mesoaciditogaceae Itoh et al. 2015
- Order Petrotogales Bhandari & Gupta 2014
- Family Petrotogaceae Bhandari & Gupta 2014
- Tribe "Marinitogeae" Pelletier 2012
- Genus Marinitoga Wery et al. 2001
- Tribe "Petrotogeae" Pelletier 2012
- Genus Defluviitoga Ben Hania et al. 2012
- Genus Geotoga Davey et al. 1993
- Genus Oceanotoga Jayasinghearachchi and Lal 2011
- Genus Petrotoga Davey et al. 1993
- Genus Tepiditoga Mori et al. 2021
- Tribe "Marinitogeae" Pelletier 2012
- Family Petrotogaceae Bhandari & Gupta 2014
- Order ThermotogalesReysenbach 2002
- Family Fervidobacteriaceae Bhandari & Gupta 2014
- Genus Fervidobacterium Patel et al. 1985
- Genus Thermosipho Huber et al. 1989 non Kantor et al. 2013
- Family Thermotogaceae Reysenbach 2002 ["Pseudothermotogaceae" Pallen, Rodriguez-R & Alikhan 2022]
- Genus Pseudothermotoga Bhandari & Gupta 2014
- Genus ?Thermopallium Duckworth et al. 1996
- Genus Thermotoga Stetter and Huber 1986
- Family Fervidobacteriaceae Bhandari & Gupta 2014
References
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- ^ ISBN 978-0-387-25497-5.
- ^ a b c d e f g Gupta, RS (2014) The Phylum Thermotogae. The Prokaryotes 989-1015. Springer Berlin Heidelberg.
- ^ a b c Reysenbach, A.-L. (2001) Phylum BII. Thermotogae phy. nov. In: Bergey's Manual of Systematic Bacteriology, pp. 369-387. Eds D. R. Boone, R. W. Castenholz. Springer-Verlag: Berlin.
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- ^ "LTP_all tree in newick format". Retrieved 23 February 2021.
- ^ "LTP_12_2021 Release Notes" (PDF). Retrieved 23 February 2021.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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- ^ Euzeby JP. List of prokaryotic names with standing in nomenclature. http://www.bacterio.cict.fr/t/thermotogales[permanent dead link].
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- ^ J.P. Euzéby. "Thermotogota". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2022-03-20.
- ^ Sayers; et al. "Thermotogae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2022-03-20.