Protein tyrosine phosphatase

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Protein-tyrosine-phosphatase
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Protein tyrosine phosphatases (EC 3.1.3.48, systematic name protein-tyrosine-phosphate phosphohydrolase) are a group of

phosphorylated tyrosine
residues on proteins:

[a protein]-tyrosine phosphate + H2O = [a protein]-tyrosine + phosphate

Protein tyrosine (pTyr) phosphorylation is a common

Functions

Together with

MAP kinase
family. PTPs are increasingly viewed as integral components of
signal transduction cascades, despite less study and understanding compared to tyrosine kinases.

PTPs have been implicated in regulation of many cellular processes, including, but not limited to:

Classification

By mechanism

PTP activity can be found in four protein families.[6][7]

Links to all 107 members of the protein tyrosine phosphatase family can be found in the template at the bottom of this article.

Class I

The class I PTPs, are the largest group of PTPs with 99 members, which can be further subdivided into

Dual-specificity phosphatases (dTyr and dSer/dThr) dual-specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual-specificity phosphatases are a group of enzymes with both Ser/Thr (EC 3.1.3.16) and tyrosine-specific protein phosphatase (EC 3.1.3.48) activity able to remove the serine/threonine or the tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes that have been phosphorylated under the action of a kinase. Dual-specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle.

LEOPARD syndrome, Noonan syndrome, and metachondromatosis are associated with PTPN11
.

Elevated levels of activated

stress disorders.[15][16] Together these findings indicate that only at optimal levels of PTPN5
is synaptic function unimpaired.

Class II

LMW (low-molecular-weight) phosphatases, or

acyl phosphates.[17][18]

The class II PTPs contain only one member, low-molecular-weight phosphotyrosine phosphatase (

LMPTP
).

Class III

Cdc25 phosphatases (dTyr and/or dThr)

The Class III PTPs contains three members, CDC25 A, B, and C

Class IV

These are members of the

EYA4. This class has a distinct catalytic mechanism from the other three classes.[20]

By location

Based on their cellular localization, PTPases are also classified as:

Common elements

All PTPases, other than those of the EYA family, carry the highly conserved active site

alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif.[23]
Functional diversity between PTPases is endowed by regulatory domains and subunits.

Low-molecular-weight phosphotyrosine protein phosphatase
SCOP2
1phr / SCOPe / SUPFAM
CDDcd00115
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
PDB1bvh​, 1c0e​, 1d1p​, 1d1q​, 1d2a​, 1dg9​, 1jf8​, 1jfv​, 1jl3​, 1ljl
Protein-tyrosine phosphatase
SCOP2
1ypt / SCOPe / SUPFAM
CDDcd00047
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
PDB1a5y​, 1aax​, 1bzc​, 1bzh​, 1bzj​, 1c83​, 1c84​, 1c85​, 1c86​, 1c87
Dual-specificity phosphatase, catalytic domain
SCOP2
1vhr / SCOPe / SUPFAM
CDDcd14498
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
PDB1d5r​, 1i9s​, 1i9t​, 1j4x​, 1m3g​, 1mkp​, 1ohc​, 1ohd​, 1ohe​, 2c46
Protein-tyrosine phosphatase, SIW14-like
Structure of a putative phosphoprotein phosphatase from Arabidopsis thaliana.[27]
Identifiers
SymbolY_phosphatase2
PfamPF03162
Pfam clanCL0031
InterProIPR004861
CDDcd14528
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
PDB1xri​, 2q47
Protein-tyrosine phosphatase-like, PTPLA
Identifiers
SymbolPTPLA
PfamPF04387
InterProIPR007482
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary

Expression pattern

Individual PTPs may be

HePTP.[28] The expression of PTPN5 is restricted to the brain, and differs between brain regions, with no expression in the cerebellum.[29][30][31]

References

Sources

External links