Voltage-gated sodium channel

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Voltage-gated sodium channels (VGSCs), also known as voltage-dependent sodium channels (VDSCs), are a group of

glial cells, neurons, etc.) with a permeability to the sodium ion Na+. They are the main channels involved in action potential
of excitable cells.

Structure

Diagram of a voltage-sensitive sodium channel α-subunit. G – glycosylation, P – phosphorylation, S – ion selectivity, I – inactivation. Positive (+) charges in S4 are important for transmembrane voltage sensing.[1]

Sodium channels consist of large alpha subunits that associate with accessory proteins, such as beta subunits. An alpha subunit forms the core of the channel and is functional on its own. When the alpha subunit protein is expressed by a cell, it is able to form a pore in the cell membrane that conducts Na+ in a voltage-dependent way, even if beta subunits or other known modulating proteins are not expressed. When accessory proteins assemble with α subunits, the resulting complex can display altered voltage dependence and cellular localization.

The alpha subunit consists of four repeat domains, labelled I through IV, each containing six membrane-spanning segments, labelled S1 through S6. The highly

transmembrane voltage, this segment moves toward the extracellular side of the cell membrane, allowing the channel to become permeable to ions. The ions are conducted through the central pore cavity, which consists of two main regions. The more external (i.e., more extracellular) portion of the pore is formed by the "P-loops" (the region between S5 and S6) of the four domains. This region is the most narrow part of the pore and is responsible for its ion selectivity. The inner portion (i.e., more cytoplasmic) of the pore is the pore gate and is formed by the combined S5 and S6 segments of the four domains. The pore domain also features lateral tunnels or fenestrations that run perpendicular to the pore axis. These fenestrations that connect the central cavity to the membrane are proposed to be important for drug accessibility.[3][4][5]

In mammalian sodium channels, the region linking domains III and IV is also important for channel function. This DIII-IV linker is responsible for wedging the pore gate shut after channel opening, inactivating it.[6]

Gating

Voltage-gated Na+ channels have three main conformational states: closed, open and inactivated. Forward/back transitions between these states are correspondingly referred to as activation/deactivation (between open and closed, respectively), inactivation/reactivation (between inactivated and open, respectively), and recovery from inactivation/closed-state inactivation (between inactivated and closed, respectively). Closed and inactivated states are ion impermeable.

Before an action potential occurs, the axonal membrane is at its normal resting potential, about −70 mV in most human neurons, and Na+ channels are in their deactivated state, blocked on the extracellular side by their activation gates. In response to an increase of the membrane potential to about −55 mV (in this case, caused by an action potential), the activation gates open, allowing positively charged Na+ ions to flow into the neuron through the channels, and causing the voltage across the neuronal membrane to increase to +30 mV in human neurons. Because the voltage across the membrane is initially negative, as its voltage increases to and past zero (from −70 mV at rest to a maximum of +30 mV), it is said to depolarize. This increase in voltage constitutes the rising phase of an action potential.

Action Potential Membrane Potential Target Potential Gate's Target State Neuron's Target State
Resting −70 mV −55 mV Deactivated → Activated Polarized
Rising −55 mV 0 mV Activated Polarized → Depolarized
Rising 0 mV +30 mV Activated → Inactivated Depolarized
Falling +30 mV 0 mV Inactivated Depolarized → Repolarized
Falling 0 mV −70 mV Inactivated Repolarized
Undershot −70 mV −75 mV Inactivated → Deactivated Repolarized → Hyperpolarized
Rebounding −75 mV −70 mV Deactivated Hyperpolarized → Polarized

At the peak of the action potential, when enough Na+ has entered the neuron and the membrane's potential has become high enough, the Na+ channels inactivate themselves by closing their inactivation gates. The inactivation gate can be thought of as a "plug" tethered to domains III and IV of the channel's intracellular alpha subunit. Closure of the inactivation gate causes Na+ flow through the channel to stop, which in turn causes the membrane potential to stop rising. The closing of the inactivation gate creates a refractory period within each individual Na+ channel. This refractory period eliminates the possibility of an action potential moving in the opposite direction back towards the soma. With its inactivation gate closed, the channel is said to be inactivated. With the Na+ channel no longer contributing to the membrane potential, the potential decreases back to its resting potential as the neuron repolarizes and subsequently hyperpolarizes itself, and this constitutes the falling phase of an action potential. The refractory period of each channel is therefore vital in propagating the action potential unidirectionally down an axon for proper communication between neurons.

When the membrane's voltage becomes low enough, the inactivation gate reopens and the activation gate closes in a process called deinactivation. With the activation gate closed and the inactivation gate open, the Na+ channel is once again in its deactivated state, and is ready to participate in another action potential.

When any kind of ion channel does not inactivate itself, it is said to be persistently (or tonically) active. Some kinds of ion channels are naturally persistently active. However, genetic mutations that cause persistent activity in other channels can cause disease by creating excessive activity of certain kinds of neurons. Mutations that interfere with Na+ channel inactivation can contribute to cardiovascular diseases or epileptic seizures by window currents, which can cause muscle and/or nerve cells to become over-excited.

Modeling the behavior of gates

The temporal behavior of Na+ channels can be modeled by a Markovian scheme or by the Hodgkin–Huxley-type formalism. In the former scheme, each channel occupies a distinct state with differential equations describing transitions between states; in the latter, the channels are treated as a population that are affected by three independent gating variables. Each of these variables can attain a value between 1 (fully permeant to ions) and 0 (fully non-permeant), the product of these variables yielding the percentage of conducting channels. The Hodgkin–Huxley model can be shown to be equivalent to a Markovian model.[further explanation needed]

Impermeability to other ions

The pore of sodium channels contains a

glutamic acid residues that line the pore. [citation needed
]

Diversity

Voltage-gated sodium channels normally consist of an alpha subunit that forms the ion conduction pore and one to two beta subunits that have several functions including modulation of channel gating.[7] Expression of the alpha subunit alone is sufficient to produce a functional channel.

Alpha subunits

Figure 1. Likely evolutionary relationship of the nine known human sodium channels.[dubious – discuss]

The family of sodium channels has 9 known members, with amino acid identity >50% in the trans-membrane segments and extracellular loop regions. A standardized nomenclature for sodium channels is currently used and is maintained by the

IUPHAR.[8]

The proteins of these channels are named Nav1.1 through Nav1.9. The gene names are referred to as SCN1A through SCN5A, then SCN8A through SCN11A.[8] The "tenth member", Nax, does not act in a voltage-gated way. It has a loosely similar overall structure. Not much is known about its real function, other than that it also associates with beta subunits.[9]

The probable evolutionary relationship between these channels, based on the similarity of their amino acid sequences, is shown in figure 1. The individual sodium channels are distinguished not only by differences in their sequence but also by their kinetics and expression profiles. Some of this data is summarized in table 1, below.

Table 1. Nomenclature and some functions of voltage-gated sodium channel alpha subunits
Protein name Gene Expression profile Associated human channelopathies
Nav1.1
 SCN1A
cardiac myocytes
 febrile epilepsy, GEFS+, Dravet syndrome (also known as severe myclonic epilepsy of infancy or SMEI), borderline SMEI (SMEB), West syndrome (also known as infantile spasms), Doose syndrome (also known as myoclonic astatic epilepsy), intractable childhood epilepsy with generalized tonic-clonic seizures (ICEGTC), Panayiotopoulos syndrome, familial hemiplegic migraine (FHM), familial autism, Rasmussens's encephalitis and Lennox-Gastaut syndrome[10]
Nav1.2
 SCN2A Central neurons, peripheral neurons inherited
autism spectrum disorder
Nav1.3 SCN3A Central neurons, peripheral neurons and cardiac myocytes epilepsy, pain, brain malformations[11][12]
Nav1.4 SCN4A Skeletal muscle hyperkalemic periodic paralysis, paramyotonia congenita, and potassium-aggravated myotonia
Nav1.5
 SCN5A Cardiac myocytes, uninnervated skeletal muscle, central neurons, gastrointestinal smooth muscle cells and Interstitial cells of Cajal Cardiac: Long QT syndrome Type 3, Brugada syndrome, progressive cardiac conduction disease, familial atrial fibrillation and idiopathic ventricular fibrillation;[13]

Gastrointestinal: Irritable bowel syndrome;[14]

Nav1.6 SCN8A Central neurons,
dorsal root ganglia, peripheral neurons
, heart, glia cells		 Epilepsy,[15] ataxia, dystonia, tremor[16]
Nav1.7
 SCN9A
neuroendocrine cells
 erythromelalgia, PEPD, channelopathy-associated insensitivity to pain[11] and recently discovered a disabling form of fibromyalgia (rs6754031 polymorphism)[17]
Nav1.8 SCN10A Dorsal root ganglia pain,[11] neuropsychiatric disorders
Nav1.9 SCN11A Dorsal root ganglia pain[11]
Nax SCN7A heart, uterus, skeletal muscle, astrocytes, dorsal root ganglion cells none known

Beta subunits

Sodium channel beta subunits are type 1 transmembrane glycoproteins with an extracellular N-terminus and a cytoplasmic C-terminus. As members of the Ig superfamily, beta subunits contain a prototypic V-set Ig loop in their extracellular domain. They do not share any homology with their counterparts of calcium and potassium channels.[18] Instead, they are homologous to neural cell adhesion molecules (CAMs) and the large family of L1 CAMs. There are four distinct betas named in order of discovery: SCN1B, SCN2B, SCN3B, SCN4B (table 2). Beta 1 and beta 3 interact with the alpha subunit non-covalently, whereas beta 2 and beta 4 associate with alpha via disulfide bond.[19] Sodium channels are more likely to stay open at the subthreshold membrane potential when interacting with beta toxins, which in turn induces an immediate sensation of pain.[20]

Role of beta subunits as cell adhesion molecules

In addition to regulating channel gating, sodium channel beta subunits also modulate channel expression and form links to the

intracellular cytoskeleton via ankyrin and spectrin.[7][21][22]
Voltage-gated sodium channels also assemble with a variety of other proteins, such as FHF proteins (Fibroblast growth factor Homologous Factor), calmodulin, cytoskeleton or regulatory kinases,[23][7][24][25][26] which form a complex with sodium channels, influencing its expression and/or function. Several beta subunits interact with one or more extracellular matrix (ECM) molecules. Contactin, also known as F3 or F11, associates with beta 1 as shown via co-immunoprecipitation.[27] Fibronectin-like (FN-like) repeats of Tenascin-C and Tenascin-R bind with beta 2 in contrast to the Epidermal growth factor-like (EGF-like) repeats that repel beta2.[28] A disintegrin and metalloproteinase (ADAM) 10 sheds beta 2's ectodomain possibly inducing neurite outgrowth.[29] Beta 3 and beta 1 bind to neurofascin at Nodes of Ranvier in developing neurons.[30]

Table 2. Nomenclature and some functions of voltage-gated sodium channel beta subunits
Protein name Gene link Assembles with Expression profile Associated human channelopathies
Navβ1 SCN1B Nav1.1 to Nav1.7 Central Neurons, Peripheral Neurons, skeletal muscle, heart, glia epilepsy (GEFS+), Brugada syndrome[31]
Navβ2 SCN2B Nav1.1, Nav1.2, Nav1.5 to Nav1.7 Central Neurons, peripheral neurons, heart, glia Brugada syndrome[31]
Navβ3 SCN3B Nav1.1 to Nav1.3, Nav1.5 central neurons, adrenal gland, kidney, peripheral neurons Brugada syndrome[31]
Navβ4 SCN4B Nav1.1, Nav1.2, Nav1.5 heart, skeletal muscle, central and peripheral neurons none known

Evolution

A voltage-gated sodium channel is present in members of the

whole-genome duplications (WGDs), yielding a set of four sodium channel gene prologues in the ancestral vertebrate, all of which were retained.[38][39] After the tetrapod/teleost split, the teleosts likely underwent a third WGD leading to the eight sodium channel prologues expressed in many modern fishes.[38] The modern, ten-paralogue sodium gene complement of mammals is thought to have arisen from a series of parallel and nested duplications involving two of the four paralogues present in the ancestor of all tetrapods.[39]

In electric fishes

Several fishes possess an electric organ functioning with voltage-gated sodium channels, allowing them to communicate, immobilize preys or deter predators, depending on the fish. Electric organs used in communication have evolved independently at least twice: in the

Mormyriformes of Africa of Africa.[40] In non-electric fishes the channels Nav1.4a and Nav1.4b are present in the muscles, while in Gymnotiformes and Mormyriformes Nav1.4a has disappeared in the muscles and is expressed in the electric organ.[40]

Sources

 This article incorporates text by Maryam Iman, Atefeh Saadabadi, and Asghar Davood available under the CC BY 4.0 license.

References

  1. PMID 12620097
    .
  2. ^ Nicholls, Martin, Fuchs, Brown, Diamond, Weisblat. (2012) "From Neuron to Brain," 5th ed. pg. 86
  3. ^ Hille, B. (1977) Local Anesthetics: Hydrophilic and Hydrophobic Pathways for the Drug-Receptor Reaction. The Journal of General Physiology, 69, 497-515. http://dx.doi.org/10.1085/jgp.69.4.497
  4. ^ Gamal El-Din, Tamer M., et al. "Fenestrations control resting-state block of a voltage-gated sodium channel." Proceedings of the National Academy of Sciences 115.51 (2018): 13111-13116. https://doi.org/10.1073/pnas.1814928115
  5. ^ Tao, Elaine, and Ben Corry. "Characterizing fenestration size in sodium channel subtypes and their accessibility to inhibitors." Biophysical Journal 121.2 (2022): 193-206. https://doi.org/10.1016/j.bpj.2021.12.025
  6. ^ Yan, Zhen, et al. "Structure of the Nav1. 4-β1 complex from electric eel." Cell 170.3 (2017): 470-482. https://doi.org/10.1016/j.cell.2017.06.039
  7. ^
    S2CID 86422657
    .
  8. ^
    S2CID 7332624
    .
  9. PMID 35301303
    .
  10. ^ Lossin C. "SCN1A infobase". Archived from the original on 2011-07-21. Retrieved 2009-10-30. compilation of genetic variations in the SCN1A gene that alter the expression or function of Nav1.1
  11. ^
    PMID 30672368
    .
  12. PMID 30146301
    .
  13. S2CID 44433455
    .
  14. PMID 24613995
    .
  15. PMID 27875746
    .
  16. PMID 16075041
    .
  17. PMID 22348792
    .
  18. S2CID 17928749
    .
  19. PMID 1375395
    .
  20. ^ "Blackboard Server Unavailable" (PDF). blackboard.jhu.edu. Retrieved 2020-07-16.
  21. PMID 10753953
    .
  22. PMID 11997395
    .
  23. S2CID 22885909
    .
  24. PMID 15317864
    .
  25. PMID 15282281
    .
  26. S2CID 21411801
    .
  27. PMID 11567041
    .
  28. PMID 9861042
    .
  29. PMID 15833746
    .
  30. PMID 11470829
    .
  31. ^
    PMID 26671757
    .
  32. PMID 25696815
    .
  33. PMID 21576472
    .
  34. PMID 18273011
    .
  35. ^
    PMID 7680747
    .
  36. PMID 24200318
    .
  37. PMID 27586287
    .
  38. ^
    PMID 20924084
    .
  39. ^
    PMID 21148285
    .
  40. ^
    PMID 21392277
    .